Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq18 89.7 4e-13 >seq18 Length=328773 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || | || || || |||||||| |||| ||| |||| Sbjct 244390 ATGCAAATTTTCGTCAAGACTCTCACCGGCAAGACCATTACGCTCGAAGTTGAATCTTCC 244449 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||||| |||||| ||||| ||||| | || ||| ||| Sbjct 244450 GATACGATCGACAACGTCAAGACGAAAATCCAGGACAAGGAGGGTATTCCACCAGACCAA 244509 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || ||||| || || || |||||||||||| || || |||||| ||| Sbjct 244510 CAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACGTTGAGCGATTACAAC 244569 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || ||||| |||| Sbjct 244570 ATTCAGAAGGAGTCGACCTTGCACTTGGT 244598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425401974381555