Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq268 102 4e-17 >seq268 Length=30626 Score = 102 bits (112), Expect = 4e-17 Identities = 295/452 (65%), Gaps = 4/452 (1%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || || || || ||||| || ||| || | ||||||||||||| || || || Sbjct 27732 CCATTCGGCGTTCTGTTCAACACGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAA 27673 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| | || | | |||||||| ||||| |||||| | || || || | | || Sbjct 27672 AAGATCACGAGCACGCGCCTCTTCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAA 27613 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 || || | |||||||| || | |||||| || || ||| | || |||||| Sbjct 27612 GATGTCGGCATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACC 27553 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 || || ||||| | ||||| ||| |||||| | ||| ||||||| |||| | || Sbjct 27552 CTGGTCAACGTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGA 27493 Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205 |||||||| | ||| | ||||| || | || || ||| | | | ||| Sbjct 27492 TGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTGAGACC 27433 Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACAA--TCTGAAACTGTATCGAAAATTCCT 26263 || || ||||| ||||| || |||||| | ||| | || ||| | || || Sbjct 27432 AATGCCGCCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGA--GTGTCGTAGATACCC 27375 Query 26264 TTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTT 26323 | ||||| || | ||||| | | | ||| || || || | ||||| |||| ||| Sbjct 27374 TCAATGCTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTG 27315 Query 26324 CCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 |||| ||| || | || || | |||||| || Sbjct 27314 CCTGCATTGAAAAGGGTAGGCGAAGCATGCGT 27283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038319260875