Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq81 123 3e-23 >seq81 Length=148755 Score = 123 bits (136), Expect = 3e-23 Identities = 194/278 (70%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || |||| || || || |||| ||||| | |||||| || | |||||||| || Sbjct 145692 CCCTCTGGTCCGTGGTAGACTGCGTAGAACGCGCTCATATTGGCCAAAAGTGCTTGGGCA 145751 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || |||||||||||||| || || |||| || ||| |||||||||| || || || || Sbjct 145752 GTACAGATGTTACTGGTCGCCTTCTCTCGTCGAATGTGCTGCTCTCGTGTCTGGAGAGCC 145811 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 | || |||||| || || |||||| ||| ||| | | | ||||| ||| Sbjct 145812 AGCCTTGCTGCAGGGTTTCCAAGCCTGTCCTTAGACAAACCAATCAGACGACCAGGGATC 145871 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 || | ||||| |||||| | ||||| ||||| || || |||||||| || |||| | Sbjct 145872 TTACGCTTATGCTTGTCGCTCGTTGCGAAGAAGGCTGCGTGAGGACCACCAAATCCGAAT 145931 Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 || | ||||| | ||| | |||| | ||||| ||| Sbjct 145932 GGTACGCCAAATCGCTGCGCATTACCAAAAGCAACATC 145969 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 ||| |||| |||||| | | || || || || || || || || ||||| |||||||| Sbjct 144536 AAAAGGTGCGAGATGCTCTTTCACGCCGATCGGGCCAACACCTGGGCCTCCGCCTCCATG 144595 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 ||||| ||||| ||||| || || || ||||| || || || || ||| |||| || Sbjct 144596 GGGAATGCAGAAAGTCTTGTGCAAGTTCAGATGGCAGACGTCGGCTCCAATCTCACCGGG 144655 Query 138281 TTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATT 138340 ||||| | || || || | || ||||| || | ||| ||||||||||||| Sbjct 144656 CGAGCAAAGACCGATTTGAGCGTTCATGTTCGCACCGTCCATATACACCTGACCACCATA 144715 Query 138341 GTCATGAACGATCT 138354 | ||||||| || Sbjct 144716 TTGGTGAACGAGCT 144729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994455573400