Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq268 159 4e-34 >seq268 Length=30626 Score = 159 bits (176), Expect = 4e-34 Identities = 704/1101 (64%), Gaps = 24/1101 (2%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || ||||| || | ||||| |||||||| | || | ||||| ||||| | Sbjct 27900 TTTGGTATGCCATTCTACAAGCCCAGACCGAGACTGGCAATCCTTTCATGCTCTACAAAG 27959 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 | || || || |||||| ||||| ||||| ||||||| || ||||| ||| | | Sbjct 27960 ACGCCTGCAATCGGAAGAGCAACCAGAAGAACCTGGGAACCATTCGCAGCTCTAATTTGT 28019 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 |||| || || | |||||| | | |||||| ||||| ||||| |||||||| | Sbjct 28020 GCACCGAGATCATTGAGTACTCTGCACCAGATGAGGTTGCTGTATGCAACTTGGCATCTA 28079 Query 76056 TCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT-GATTATGAAAAACTTCAT 76114 | || ||||| | | ||| | | | || || | | |||| | || | || Sbjct 28080 TGGCACTTCCGACCTTTGTTGACGTCCA-ACGCGGCGTCTACGATTTCCAGAAGTTGCAC 28138 Query 76115 GAAATCACAAAGATTGTTA-CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 ||| | || ||| ||| | || || | || || ||||||| ||| ||||| Sbjct 28139 GAAGTTACCCAGACTGTCATCCGCAACTTGAATAAGA-TCATTGATGTCAATCACTATCC 28197 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 ||| || || || || || | || | || | || || || || Sbjct 28198 TGTTCCTGAAGCATACAACAGCAACTCCCGTCATCGTCCAGTCGGAGTTGGCGTACAGGG 28257 Query 76234 TCTCGCGGATGTATTTATTTTGTGCCGCTACG-----CATTTGATTCAGATGAAGCCAAG 76288 ||| || |||| ||| | |||| || | || || || |||||| ||| Sbjct 28258 TCTTGCTGATGC-----TTTCCTCGCGCTTCGTCTGCCTTTCGAGTCTCCTGAAGCAAAG 28312 Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 || | ||| || ||||| |||||||| || ||||| || || | || || Sbjct 28313 AAGCTCAATATTCAAATCTTCGAAACCATTTACCACGCTGCCTTGACCTCTTCCTGCAAA 28372 Query 76349 TTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTG 76408 | || ||| | ||| | || | | | |||| ||||| | || ||||| | Sbjct 28373 CTTGCACAAGAAGAGGGTACGTACCAATCCTACAAGGGCTCTCCAGTATCGCAAGGTATC 28432 Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCA 76466 || || | ||| |||||| || || | ||||| | || || ||||||||| |||| Sbjct 28433 CTACAATATGACATGTGG-AACGTCACACCAACAGATCT-CTGGGACTGGGATTCGCTCA 28490 Query 76467 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 76526 ||| || || || | || | || ||| ||||| |||| ||||||||||| | Sbjct 28491 AGGCTGATATAAAAAAGCACGGCGTCCGCAACTCGCTTTTAGTGGCCCCAATGCCAACTG 28550 Query 76527 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCT 76586 ||||||| | ||||| |||| ||||| || || |||||||| || | ||||||| Sbjct 28551 CCTCCACATCTCAAATTCTGGGCTTCAATGAGTGTTTCGAACCATATACGTCGAACATCT 28610 Query 76587 ACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACC 76646 || || | || || || || || | |||||| || |||| || | Sbjct 28611 ACTCACGACGTGTGCTTGCTGGCGAATTCCAAGTCGTCAACCCATGGCTACTCAAGGATC 28670 Query 76647 TCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTT 76706 || |||| ||||||||||| | |||||||| ||| ||| | | |||||||| Sbjct 28671 TCGTCGAGATGGGTCTCTGGTCTGACAATATGAAGAATCGCATCATTGCCGAGGGTGGTT 28730 Query 76707 CCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGG 76766 | |||||||| || | | ||||| ||||| |||||| ||||||| || || |||| Sbjct 28731 CTATTCAAAACATTCCCAACATCCCCGATGACATCAAGGCTCTCTACAAGACCGTCTGGG 28790 Query 76767 AAATCAAGATGAAAGATGTCAT--TGAC-ATGGCCGCAGATCGTGGTCGCTTCATTGATC 76823 | |||| | || | | ||| | || |||||||| ||||||||| || || |||| Sbjct 28791 AGATCA--GTCAACG-TACCATCATCACAATGGCCGCCGATCGTGGTGCGTTTATCGATC 28847 Query 76824 AAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGC 76883 || ||| || |||| | |||| | || || ||| ||| || | || |||| Sbjct 28848 AATCTCAGAGCTTGAACATTCACATGAAGGAGCCTACCATGGGCAAAATCACGTCCATGC 28907 Query 76884 ATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGCGA 76943 || | | |||||| ||| | || || |||||||||||||| ||| | | ||| Sbjct 28908 ATTTTGCTGGCTGGAAATTGGGCTTGAAGACTGGAATGTACTATCTTCGAACCATGGCTG 28967 Query 76944 AAGCCCGACCAATTCAGTTCA 76964 | ||| |||||||||| Sbjct 28968 CCTCAGCACCTATTCAGTTCA 28988 Score = 152 bits (168), Expect = 6e-32 Identities = 357/535 (67%), Gaps = 13/535 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| ||||||| || || | ||||||||||| || |||||||| ||| | Sbjct 27187 CCACAACACATGATCATGCGTGTGGCTGTTGGCATCCACGGAGAGGACATTGAAGCTGCC 27246 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | |||| ||| || | |||||| ||| || |||| || || | || ||||| | Sbjct 27247 ATTCAGACTTACAACTACATGTCCAGCAA-ATA-CTTCACGCATGCTTCGCCTACCCTTT 27304 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||| || ||||| |||||| | ||| ||||| ||| | | || ||||||| Sbjct 27305 TCAATGCAGGCACACCTCAACCGCAACTTTCCTCCTGCTTTCTTGTTGACATGAAGGAGG 27364 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | |||||||| | ||||| | ||||| ||||||||| |||| Sbjct 27365 ACAGCATTGAGGGTATCTACGACACTCTCAAAACTTGTGCTATGATCTCAAAGACCGCTG 27424 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | || ||||| | || | || | |||||| | ||| ||| | || |||| Sbjct 27425 GCGGCATTGGTCTCAACGTGCACCGCATCCGAGCCACTGGATCATACATTGGAGGAACAA 27484 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || ||| |||| | |||| ||||| || || || | || || || ||||| | Sbjct 27485 ACGGCACATCCAATGGACTAGTTCCTATGCTCCGTGTTTTCGATGCGACTGCTCGCTACG 27544 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | || | || ||||| || | |||| |||| |||| ||||||| Sbjct 27545 TTGACCAGGGTGGAAACAAGCGTC---CTGGTGCGTTCGCAATCTATCTGGAGCCATGGC 27601 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 ||||||| ||| | | | | || | || ||||| ||| | |||||||| || Sbjct 27602 ATGCCGACATCTTCAACTGGTTGGACCTGAGAAAGAACCACGGTAAAGAAGAGGCGCGTG 27661 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | | ||||| || | || |||||||||||||||| ||||||||||| ||||| Sbjct 27662 CTCGTGATCTTTTCTACGCCTTGTGGATTCCAGACCTGTTCATGAAGCGTGTTGA 27716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565535869600