Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq23 268 1e-66 seq18 156 6e-33 seq13 123 3e-23 seq27 111 2e-19 seq16 96.9 5e-15 seq4 93.3 6e-14 seq17 86.0 8e-12 >seq23 Length=300837 Score = 268 bits (296), Expect = 1e-66 Identities = 480/696 (69%), Gaps = 9/696 (1%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||| |||||||| | || || || ||||| || || ||| | | | | || Sbjct 257809 TCCAGCTATCGGTATCGACCTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGACGA 257868 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 || | || || ||| | |||||||| || ||||| ||||| || |||| ||||||||| Sbjct 257869 CCGCATCGAAATCATCGCCAATGACCAGGGTAACCGAACAACGCCGTCGTTCGTTGCCTT 257928 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 || || | ||| || ||| |||| || | || || || ||| || |||||||| Sbjct 257929 CACCGACACTGAGCGCCTCATTGGTGACTCGGCGAAGAACCAGGTCGCCATGAACCCCCA 257988 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || ||||| ||||| ||||| || || ||||||||||| ||||| | ||||| Sbjct 257989 AAACACAGTCTTCGACGCCAAGCGCCTCATCGGTCGCAAGTTCGCGGATGCTGAGGTCCA 258048 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATG 195592 | |||||| ||| ||| | | | ||| | || | | | ||| |||||| | Sbjct 258049 GGCCGATATGAAGCACTTTCCCT-TCAAGGTCGTCGACAAGGGCGGC----AAGCCTGTT 258103 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 | | | || || | || |||| || || | || |||||||| || || ||| Sbjct 258104 GTCCAGATCGAGTTCAAGGGCGAGACTAAGACTTTCACGCCAGAAGAAATCTCTTCGATG 258163 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 | |||| |||||| ||||| || || || | | | || || || || | || Sbjct 258164 ATCTTGACCAAGATGCGAGAGACAGCTGAGTCATACCTCGGAGGCACCGTCAACAACGCC 258223 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 || || || || || || ||||||| || || |||||||| || || |||||||| | | Sbjct 258224 GTCGTCACAGTCCCAGCCTACTTCAACGACTCGCAACGACAAGCCACCAAGGACGCCGGT 258283 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 || || || || || |||| | | |||||||| || ||||| || || || ||||| Sbjct 258284 CTCATCGCCGGCCTCAA-TGTCCTCCGTATTATCAACGAGCCAACCGCCGCCGCCATTGC 258342 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || ||||| |||||||| || ||| |||||| | || || || |||||||| Sbjct 258343 CTACGGTCTCGACAAGAAGGCCACCGGAGAGCGAAATGTCCTCATTTTCGACCTCGGTGG 258402 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || || || |||||||| || |||| || |||| || || |||||||| ||| |||| Sbjct 258403 CGGAACCTTCGATGTCTCCCTCCTCACCATCGAAGAGGGCATCTTCGAAGTCAAGTCTAC 258462 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| || ||||||||||| || Sbjct 258463 CGCCGGTGACACGCATCTCGGGGGTGAAGATTTTGA 258498 Score = 210 bits (232), Expect = 3e-49 Identities = 407/598 (68%), Gaps = 7/598 (1%) Strand=Plus/Plus Query 196034 AAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGT 196093 ||||| ||| || || ||| | | || || ||||| || | ||||| || || || Sbjct 258599 AAGAAGGATCTTACTTCCAATGCACGTGCCCTCCGTCGTCTCCGCACTGCTTGCGAGCGG 258658 Query 196094 GCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGAC 196153 ||||| || || ||||| | || || || ||||||| || || | | || Sbjct 258659 GCCAAGCGCACACTCTCCAGCTCAGCCCAGACGTCCATTGAGATCGACTCTCTCTACGAG 258718 Query 196154 GGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTG 196213 || || ||||| || || | || || ||||| || || || ||||| | || | Sbjct 258719 GGTATCGACTTTTACACCTCGATCACTCGTGCCCGCTTCGAGGAGTTGTGCCAAGACCTC 258778 Query 196214 TTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCT 196273 || | ||||| || || || | || || |||||||| ||||| || || || Sbjct 258779 TTCCGCTCTACCATGGAGCCAGTCGAGCGCGTTCTCCGTGACGCCAAGATCGACAAATCC 258838 Query 196274 AAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATG 196333 || | || || ||||| || || || || ||||||||||| ||||| || || | Sbjct 258839 TCCGTCCACGAGATCGTCCTCGTCGGTGGTTCCACCCGTATTCCCAAGATCCAGAAGCTC 258898 Query 196334 CTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTT 196393 | ||| ||||||||| || || |||||| | |||||||| ||||| || ||| Sbjct 258899 GTCTCTGACTTCTTCAACGGGAAGGAGCCAAACAAGTCCATCAACCCTGATGAGGCTGTT 258958 Query 196394 GCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAA--CGTCC 196451 || |||||||| ||||||||||| ||||||||||| |||| | | | || | || Sbjct 258959 GCATATGGTGCCGCCGTTCAGGCCGCTATTCTCTCTGGTGATACCTCCAGCAAGTCTACC 259018 Query 196452 A---AGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTG 196508 | |||||| |||||||||| || || || | ||| ||||| | || || || |||| Sbjct 259019 AATGAGATCT--TGCTACTTGACGTCGCCCCGCTGTCCATGGGTATCGAGACTGCCGGTG 259076 Query 196509 GTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCT 196568 |||| |||||| | || | | ||||| || || || || |||||| |||||| Sbjct 259077 GTGTCATGACTGCTCTCATCAAGCGCAACACCACCATCCCCACCAAGAAGTCCGAAGTCT 259136 Query 196569 TTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACG 196626 | ||||| | |||||| || |||||||| |||| || || |||| ||||| ||||| Sbjct 259137 TCTCAACCTTTTCCGACAACCAACCAGGCGTTCTCATCCAGGTATTCGAAGGCGAACG 259194 Score = 131 bits (144), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711 || |||| ||||| | || ||||| || | || || | ||||||||||| ||| | Sbjct 259273 CTCGGAAAGTTCGAGCTTACTGGGATCCCGCCAGCCCCGCGCGGTGTTCCACAAATTGAG 259332 Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCT 196771 ||| ||||| || ||||| ||||| || | || ||| | || | || |||| | | Sbjct 259333 GTTACTTTCGACATTGACGCCAATGGTATCATGAATGTCTCTGCCGTTGAGAAGGGTACC 259392 Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 |||||||| | |||||||| |||||||| ||||| || || ||||| |||||||||||| Sbjct 259393 GGCAAATCCAACAAGATTGTCATTACCAACGACAAAGGACGCCTTTCCAAGGAGGAAATT 259452 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 || |||||| | || || || ||||||| || || || ||| Sbjct 259453 GAGCGTATGTTGGCTGAAGCCGAGAAGTACAAGGCCGAGGATGAG 259497 >seq18 Length=328773 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||||||||| ||||| ||||| || | || || Sbjct 243958 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAATGTGAAGACC 244017 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||||||||| |||||||| || ||||| || ||||| || | || || || || ||| Sbjct 244018 AAGATTCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGTTTGATCTTCGCCGGCAAA 244077 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || |||||| | || |||||| | || ||||| || || || ||| Sbjct 244078 CAGCTCGAGGACGGCCGAACCCTCTCGGACTACAACATCCAGAAGGAATCCACACTCCAC 244137 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| || | ||||| |||||| Sbjct 244138 CTTGTCCTCCGCCTTCGTGGTGGT 244161 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || || || || || || || || || ||||| ||||| | Sbjct 244385 GTGGTATGCAAATTTTCGTCAAGACTCTCACCGGCAAGACCATTACGCTCGAAGTTGAAT 244444 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || ||||| ||| |||| | || || || || ||||| || |||||||| | Sbjct 244445 CTTCCGATACGATCGACAACGTCAAGACGAAAATCCAGGACAAGGAGGGTATTCCACCAG 244504 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || || || || || || || || || || | |||||||||||||| | |||| Sbjct 244505 ACCAACAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACGTTGAGCGATT 244564 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| |||| |||||||| || | ||| | || || | ||||| || || Sbjct 244565 ACAACATTCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGG 244616 >seq13 Length=375566 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || || || ||||| || ||||| || || || || ||||||||||| |||||||| ||| Sbjct 314853 TTCGTCAAGACCCTAACGGGAAAGACCATAACTCTTGAGGTTGAGTCCTCAGACACCATC 314912 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 ||||| ||||| ||||||| ||||| || ||||| |||||||| ||||| || || | Sbjct 314913 GATAATGTCAAAACCAAGATACAAGACAAAGAAGGAATTCCACCAGATCAACAGCGGTTG 314972 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || || || || || || | || |||||||| || | || |||||| | || ||| Sbjct 314973 ATCTTCGCCGGGAAGCAATTAGAGGATGGACGCACTTTGAGCGACTACAACATCCAGAAG 315032 Query 172051 G 172051 | Sbjct 315033 G 315033 >seq27 Length=290026 Score = 111 bits (122), Expect = 2e-19 Identities = 272/409 (67%), Gaps = 10/409 (2%) Strand=Plus/Minus Query 196028 AAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGT 196087 |||| || || ||| ||||| || || | ||||| ||| || | | || || ||| Sbjct 254310 AAGACCAAAAAGGATTTTTCTAAGGATGCTCGTGCTCTGCGTAGGTTGCGTACCGCTTGT 254251 Query 196088 GAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA--ATGGTTGAGATTGATTCGT 196145 ||||||||||| || ||||| || | || |||| || | ||||| || || || Sbjct 254250 GAACGTGCCAAGCGTACTCTTTC--CAGCGCCTCATCCACCACTGTTGAAATCGACTCTC 254193 Query 196146 TGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACT 196205 | || ||||| || || | ||||| || ||||| || || || || | |||| Sbjct 254192 TTTTCGACGGCGAGGATTTTACCGCCACTATCACACGTGCCCGCTTCGAGGACCTCAACT 254133 Query 196206 CTGA---TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGA 196262 | | ||| | | | | | | | || ||||| || || || |||||||| Sbjct 254132 CCAAGGCTTTCTCTGGCAC---TCTCCAGCCCGTTGAGCAGGTTCTCAAGGACGCAAATC 254076 Query 196263 TGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGA 196322 | || ||| |||||||| || || || || || || || || ||||||||||| | || Sbjct 254075 TTGAGAAGAGCAAGGTTGACGAGATCGTGCTCGTTGGTGGTTCCACCCGTATTCCTAGGA 254016 Query 196323 TTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGG 196382 | || || | ||||| |||||||| || || | | | || | |||||||| | Sbjct 254015 TACAGAAGCTTCTTTCGGAGTTCTTCAACAACAAGAAGCTCGAGAAGAGCATCAACCCTG 253956 Query 196383 ATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||| || ||||| || ||||| || || ||||||| ||| || || || Sbjct 253955 ATGAGGCTGTTGCGTACGGTGCTGCTGTCCAGGCTGGTATCCTTTCTGG 253907 >seq16 Length=359911 Score = 96.9 bits (106), Expect = 5e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013 ||| |||||||| ||||| || || |||||||| | || || || || || ||||| || Sbjct 61216 AGACAAGGAAGGGATTCCTCCAGACCAGCAACGCTTGATCTTCGCAGGAAAGCAGCTCGA 61157 Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || || || || | || |||||| | ||||||||||| ||||| ||||| ||||| Sbjct 61156 GGACGGCCGCACTCTATCCGACTACAACATCCAAAAGGAGTCGACTCTCCACCTCGTTCT 61097 Query 172074 AAGGCTTCGGGGTGGT 172089 | ||||| || ||| Sbjct 61096 CCGACTTCGTGGCGGT 61081 >seq4 Length=604038 Score = 93.3 bits (102), Expect = 6e-14 Identities = 241/364 (66%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 195627 TTGCTCCC--GAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATC 195684 || ||||| || ||||| || | ||||| || ||||||||||| || || || Sbjct 586685 TTTCTCCCCTGAGGAAATCTCCGCCATGGTTCTGCAAAAGATGAAGGAAGTCGCCGAGTC 586744 Query 195685 TTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTC 195744 | | |||| | | || | || ||||||||||| || || ||||||| || Sbjct 586745 CTACTTGGGACAGAAGGTTTCCAACGCCGTTGTGACTGTCCCGGCCTACTTCAACGACAA 586804 Query 195745 ACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTA 195803 || || || ||||||||||| | | || || ||||| || |||| | | || Sbjct 586805 CCAGCGTGCCGCCACAAAGGACGCGGGCACCATCGCCGGTCTCAA-TGTCCTCCGTGTTG 586863 Query 195804 TCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATA 195863 |||| || ||||| || || || | || || |||||||||||| | | || || || Sbjct 586864 TCAACGAGCCAACCGCAGCCGCTTTGGCATACGGTCTGGACAAGCAGAGCGAGGAGGAGC 586923 Query 195864 AAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTG 195923 | | | ||| || | |||||||| || || |||||||| |||| | | | Sbjct 586924 GCCAGATCATCGTCTACGACTTGGGTGGTGGAACTTTCGATGTCTCCGCCCTCACTGTCG 586983 Query 195924 AAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATT 195983 | |||| | ||||| || | || || ||||| || ||||||||||||||||||| Sbjct 586984 ACTCTGGTGTCTTCGAGGTCCTCTCCACCGCCGGTGACACCCATCTAGGTGGTGAAGATT 587043 Query 195984 TCGA 195987 | || Sbjct 587044 TTGA 587047 >seq17 Length=345208 Score = 86.0 bits (94), Expect = 8e-12 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 198558 GGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCG 198617 |||| ||| || | ||| | || |||||||| || || || || || || || |||| Sbjct 151621 GGTGTTCTGCTTGTTGGTCCGCCTGGTACTGGCAAGACTCTACTTGCACGAGCAGTCGCC 151680 Query 198618 GGTGAATCGAGTGTCCCCTTTCTTCAGTGC-TCCGCGGCGAGTTTCATCGAGATGTTCGT 198676 |||||| | | || || ||||||| ||| |||| | || ||| ||| |||| || Sbjct 151681 GGTGAAGCCGGCGTTCC-TTTCTTCTATGCGTCCGGGTCGGAATTCGACGAAATGTATGT 151739 Query 198677 TGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAA-TCAACCAT 198735 |||||| || || ||||| || ||||| ||||| | ||||| | ||| || || | Sbjct 151740 TGGTGTCGGCGCGAAGCGTGTTCGGGAGCTCTTCACGAGTGCACGCGCAAAGTC--CCCT 151797 Query 198736 G-TATCATCTTCATTGATGAGATTGACGC 198763 | |||||||||||| || ||| | || || Sbjct 151798 GCTATCATCTTCATCGACGAGTTGGATGC 151826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657857918312400