Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq13 116 7e-21 seq18 95.1 2e-14 >seq13 Length=375566 Score = 116 bits (128), Expect = 7e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| |||||||| || ||||| || || || | ||||||||| || || ||||||||||| Sbjct 314999 ATCCTCTAATTGCTTCCCGGCGAAGATCAACCGCTGTTGATCTGGTGGAATTCCTTCTTT 314940 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||||| |||||||| | ||| || || || || |||||||| || |||||||| Sbjct 314939 GTCTTGTATCTTGGTTTTGACATTATCGATGGTGTCTGAGGACTCAACCTCAAGAGTTAT 314880 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAA 193351 || || || ||||| || || || || Sbjct 314879 GGTCTTTCCCGTTAGGGTCTTGACGAA 314853 >seq18 Length=328773 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||| ||||| || | ||| || ||| || || ||| ||||| | | Sbjct 244604 CGGAGCACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCA 244545 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| |||||||| || || | | |||||| || || || || || || || Sbjct 244544 TCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTG 244485 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || ||||| || || | || || ||||||||||| |||||||| || || || Sbjct 244484 TCCTGGATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATG 244425 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || |||||||| Sbjct 244424 GTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648271104400