Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq50 109 2e-18 seq2 100 8e-16 >seq50 Length=219468 Score = 109 bits (120), Expect = 2e-18 Identities = 203/292 (70%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 288937 TTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAA 288996 || || |||||||| ||| || |||||||| || || ||| | ||||||||| | Sbjct 131671 TTGAAACCATCCATTTCTGTCAATATTTGATTGAGCGTGCTTTCTCGCTCATCATTTCCA 131730 Query 288997 CCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAA 289056 || | ||| | ||| || |||| || | |||||| || |||||||||||| Sbjct 131731 CCGCCGAAATTGTTCT--TCGATCTCGATTTT-CCGATAGCATCGATCTCGTCAATGAAA 131787 Query 289057 ATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCA 289116 || | ||| || | || | ||||||| | || || | |||| || ||||| | ||| Sbjct 131788 ATGATACAAGGCGTGTTCTTTCTCGCAGTAGCGAACAGATCTCGCACGCGGGAAGGACCA 131847 Query 289117 AGACCAACATACATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTG 289174 | ||||||| |||| || || ||||| ||| | || || |||| ||| | ||| | Sbjct 131848 ACACCAACAAACATCTCCACGAATTCGGAACCACTGACAC-TGAA-GAACGGAACACCAG 131905 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||||| ||| |||| |||| || || |||||||| |||||||| || || Sbjct 131906 ACTCGCCAGCTGTTGCCTTCGCAAGTAGAGTCTTACCAGTTCCAGGCGGCCC 131957 >seq2 Length=644928 Score = 100 bits (110), Expect = 8e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||||| | || | |||||| ||||||||||| || | ||||||||||||||| ||| Sbjct 483791 GCACCGTAGGCGATGAGACAATCGCGCTCCATTTCTCCCAGACGAAGACCACCATCTCGA 483732 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | ||| |||| ||||||||||||||| | |||||||| | | || || Sbjct 483731 GCGCGACCTTCGGTAGGCTGACGAGTGAGCAAGGCGATAGGACCAGTAGCTCGTGCGTGC 483672 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664 ||| || | ||||| ||||| | ||||||| || || |||| ||||||| | Sbjct 483671 ATCTTGTCTTGCACCATGTGCTTCAATTTCTGGTAGTATATCGGCCCGAAGAAGATGTAC 483612 Query 251665 GAAGGCAT 251672 || || || Sbjct 483611 GAGGGGAT 483604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807322573665