Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq23 93.3 3e-13 >seq23 Length=300837 Score = 93.3 bits (102), Expect = 3e-13 Identities = 197/292 (67%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 ||||||||||| |||||||||||||| || | | || | || | |||| | ||| Sbjct 258510 ACAAGACGATTGTCAAAATCTTCACCCCCGAGATGCGTGTCACCGGCGGTAGACTTGACT 258451 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||| | | | || | ||||| |||||| ||||| | || Sbjct 258450 TCGAAGATGCCCTCTTCGATGGTGAGGAGGGAGACATCGAAGGTTCCGCCACCGAGGTCG 258391 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAG 282359 ||||| || ||||| | || | ||| || || || ||||| || |||| || | Sbjct 258390 AAAATGAGGACATT--TCGCTCTCCGGTGGCCTTCTTGTCGAGACCGTAGGCAATGGCGG 258333 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 | || ||||| || || ||||| | | ||||| || || || || || || || | Sbjct 258332 CGGCGGTTGGCTCGTTGATAATACGGAGGACATTGAGGCCGGCGATGAGACCGGCGTCCT 258273 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 | |||||||||| ||| || ||||| || || || || || || | ||||| Sbjct 258272 TGGTGGCTTGTCGTTGCGAGTCGTTGAAGTAGGCTGGGACTGTGACGACGGC 258221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740603642803170