Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 7e-15 seq13 84.2 4e-11 >seq18 Length=328773 Score = 96.9 bits (106), Expect = 7e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || ||||| ||||| || || || || || || ||| ||| Sbjct 244148 CGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCG 244089 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || ||||| || || ||||| | | || || || || || ||||||||||| Sbjct 244088 TCCTCGAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTG 244029 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| | || ||||| || || || || | | || || || | || || Sbjct 244028 TCTTGAATCTTGGTCTTCACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATG 243969 Query 82776 GTCTTGCCTGTCA 82788 |||||||| |||| Sbjct 243968 GTCTTGCCAGTCA 243956 >seq13 Length=375566 Score = 84.2 bits (92), Expect = 4e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || |||| ||| || || || ||||| | | ||||||||||| || |||||||| Sbjct 315001 CCATCCTCTAATTGCTTCCCGGCGAAGATCAACCGCTGTTGATCTGGTGGAATTCCTTCT 314942 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGT 82771 || ||||| ||||| | ||| ||||| || || || || | ||| || || || | ||| Sbjct 314941 TTGTCTTGTATCTTGGTTTTGACATTATCGATGGTGTC-TGAGGACTCAACCTCAAGAGT 314883 Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 ||| ||||| || || | ||||| || || Sbjct 314882 TATGGTCTTTCCCGTTAGGGTCTTGACGAA 314853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981820344084755