Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq268 134 1e-26 seq18 129 6e-25 seq171 123 2e-23 >seq268 Length=30626 Score = 134 bits (148), Expect = 1e-26 Identities = 459/694 (66%), Gaps = 25/694 (4%) Strand=Plus/Minus Query 149088 TCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACG 149147 ||| | || || ||||||| ||| |||||||| |||| ||| || ||| | | || Sbjct 27770 TCGGCAAGGCCAGGGCACTCGTGAGGGCACATCAGCGTCCATTCGGCGTTCTGTTCAACA 27711 Query 149148 CGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGC-CTTGCAGTC 149206 |||||||| ||||| || || | ||| | ||||| | || || || || | || || Sbjct 27710 CGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGCGCC-TC 27652 Query 149207 TTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTC 149266 ||| || ||| | ||||| | | | |||| ||||| || ||||| ||||| Sbjct 27651 TTCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAAGATGTCGGCATGCCATGGCTC 27592 Query 149267 AATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCAT 149323 | || | |||| ||| || |||||| || |||||||| |||| ||| | || Sbjct 27591 CAGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACCCTGGTCAACGTAGCG-AGCA- 27534 Query 149324 GTTG--TTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTA 149381 || | | || || || | |||||| | | ||| ||| |||||||| || | | Sbjct 27533 GTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGTTCCTCCA 27474 Query 149382 ATGC--GACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACT 149439 ||| || | | | | ||||| | ||||||||||| || |||||||| || || Sbjct 27473 ATGTATGA-TCCAGTG-GCTCGGATGCGGTGCACGTTGAGACCAATGCCGCCAGCGGTCT 27416 Query 149440 TTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCA 149499 ||||||| || || ||| || |||||| ||||| |||||||| ||||| Sbjct 27415 TTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCA 27356 Query 149500 TGGTCAGC-AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTG 149558 | |||| | |||||||| ||| | | |||||| | | ||||| || ||| | ||| Sbjct 27355 T-GTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTGCCTGCATTGAAAAGGGTA 27297 Query 149559 GGGCTGGCGTGTGTAAAATATTT-CTGGCTCATCATCTCGTACGACTCGA--GCACGCGG 149615 || || || || || ||||| |||| ||| | ||| | || | ||| || Sbjct 27296 GGCGAAGCATGCGTGAAGTATTTGCTGG-ACATGTAGTTGTAAGTCTGAATGGCA-GC-T 27240 Query 149616 TCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCC 149675 || ||||| || || |||||||| | || || ||||| | ||| || || || ||||| Sbjct 27239 TCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATGTGTTGTGGACGCTCA 27180 Query 149676 GCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTT--TTCTAGTGTCTTGTAGCCAAAGT 149733 || || ||| | ||| || | ||| || | || || |||||| ||||||||| Sbjct 27179 GCGACCTTGCCGCTTATTCGCAGTAGGTA--CGATCGCTCAAGCGTCTTGAAGCCAAAGT 27122 Query 149734 ACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 | | ||||| || || | ||| | ||||||| Sbjct 27121 ATTGGTAGTTGAAATCTCTATCGTAGACAATGGC 27088 Score = 109 bits (120), Expect = 5e-19 Identities = 595/935 (64%), Gaps = 36/935 (4%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCTC 148120 || || || ||||| ||||| || ||||||||| |||| | | || || ||||| Sbjct 28848 TGATCGATAAACGCACCACGATCGGCGGCCATTGTGATGATGGTACGTTGACTG-ATCTC 28790 Query 148121 CCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGA 148180 |||| | |||||||| || |||||| | |||||| ||| | ||| || | || Sbjct 28789 CCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGATGTTGGGAATGTTTTGAATAGA 28730 Query 148181 GCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAG 148240 || | | |||| || |||| ||| | ||| | | || | ||||| || Sbjct 28729 ACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGACCAGAGACCCATCTCGACGAG 28670 Query 148241 GTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATA 148300 || | || || | | || || || || || ||||| || ||||| || || || Sbjct 28669 ATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCCAGCAAGCACACGTCGTGAGTA 28610 Query 148301 CACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGC 148360 | ||| |||| | ||||| || |||| ||| ||||| ||| || | || | || Sbjct 28609 GATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCCCAGAATTTGAGATGTGGAGGC 28550 Query 148361 CGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTT 148420 || ||||| || || | ||||||||||| | ||| | |||||||| | ||| Sbjct 28549 AGTTGGCATTGGGGCCACTAAAAGCGAGTTGCGGACGCCGTGCTTTTTTATATCAGCCTT 28490 Query 148421 CAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAAT 148480 || | ||||||||||||| | ||||| |||||||||||||| || || || || Sbjct 28489 GAGCGAATCCCAGTCCCAGAGATCTGTTGGTGTGACGTTCCACATGTCATATTGTAGGAT 28430 Query 148481 GCCGCG-GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTT 148539 || | | || | || ||||| ||| || ||||| || | | || |||| Sbjct 28429 ACCTTGCGATA-CTGGAGAGCCCTTGTAGGATTGGTACGTACCCTCTTCTTGTGCAAGTT 28371 Query 148540 CGCAGCTCG-CCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 |||| | || || || ||| |||||| || ||| ||||| | |||||| | Sbjct 28370 TGCAGGAAGAGGTCAAG-GCAGCGTGGTAAATGGTTTCGAAGATTTGAATATTGAGCTTC 28312 Query 148599 GCCGC----CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 || || | ||| | |||| ||| ||| | || || || ||||| || Sbjct 28311 TTTGCTTCAGGAGAC----TCGAAAGGCAGACGAAGCGCGAGGAAAGCATCAGCAAGACC 28256 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-G 148713 ||||||||| || || | || || || |||| | | || || || | | Sbjct 28255 CTGTACGCCAACTCCGACTGGACGATGACGGGAGTTGCTGTTGTATGC-TTCAGGAACAG 28197 Query 148714 GATAGTGGTTGCGGTCGATGATCTT-GTCAAGATTGCGCACCACCACCTTTGTAATTCTG 148772 ||||||| ||| || |||||||| ||||| ||||| | || || |||| | | Sbjct 28196 GATAGTGATTGACATCAATGATCTTATTCAAG-TTGCGGATGACAGTCTGGGTAACTTCG 28138 Query 148773 CGCAGCAATTCAAAATCGTA---------CTTGTCATCTACGATGCATCGGTTCACGGCG 148823 ||| | | |||||||| | | | || || | | |||| | || Sbjct 28137 TGCAACTTCTGGAAATCGTAGACGCCGCGTTGGACGTCAACAAAG-GTCGG--AAGTGCC 28081 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 ||||| || | ||||| || || |||||| || || |||||| | |||||||| | Sbjct 28080 ATAGATGCCAAGTTGCATACAGCAACCTCATCTGGTGCAGAGTACTCAATGATCTCGGTG 28021 Query 148884 CACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 |||| ||| ||||| || | |||| |||||| || |||||||| | ||||| Sbjct 28020 CACAAATTAGAGCTGCGAATGGT---TCCCAGGTTCTTCTGGTTGCTCTTCCGATTGCAG 27964 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||| ||||| |||||| | || |||||| || Sbjct 27963 GCGTCTTTGTAGAGCATGAAAGGATTGCCAGTCTC 27929 >seq18 Length=328773 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| || ||| ||| |||||||||||||||||| Sbjct 244358 GTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACC-GTCCTCGAGCTGCTTGCC 244300 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||| ||||| || |||||||| |||||||| |||||| ||| Sbjct 244299 GGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 244240 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || |||||| || | ||| | ||| || || |||| || Sbjct 244239 GACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTTACCCGTCAAGGT 244180 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 244179 CTTCACGAAGATCTGCAT 244162 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||| ||||| ||| | || | ||||||||||| || ||||| |||||||| Sbjct 244089 GTCCTCGAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTT 244030 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||| | | || | |||||| ||| ||| || |||| ||||| Sbjct 244029 GTCTTGAATCTTGGTCTTCACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGAT 243970 Query 133625 GGTTTTGCCGGTCA 133638 ||| ||||| |||| Sbjct 243969 GGTCTTGCCAGTCA 243956 >seq171 Length=70297 Score = 123 bits (136), Expect = 2e-23 Identities = 346/521 (66%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| |||||||| || || ||||| || || | | || ||||| | Sbjct 54436 CTGGTAATCACCGACACGTTTCTCGAAGAAATTTGTCTTTCCGGCGAGAGAGATGTTCTC 54495 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCA- 120469 ||| || ||||| || || || ||| || || | ||| | || | |||| Sbjct 54496 CATGAAGTCGAAGGGATTCACAGCATTATAGACCTTGACATTGCCGA---GTGCAAGCAA 54552 Query 120470 --GTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA- 120526 | || || || |||||||||||||| | ||||||| | | |||||||| |||| Sbjct 54553 GAGACGATCAGCGACAAACTCAATGTATTGGCACATGAGCCCTGAATTCATGCCGAGCAG 54612 Query 120527 ACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586 | || || | ||| | || || || | |||||| | || |||||| ||| | Sbjct 54613 TCTGCA-TGGTAGTGCCTCGCTCAAGAATTCTTGCTCAATTTGAACTGCCTCCGTGATGA 54671 Query 120587 TGGCGAGCATAGTGT---GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 ||||| | | || | | | ||| |||||| | | || | | | || |||| Sbjct 54672 TGGCGCGGACAGCTTCAGGAGCAGGCTTCTTGT-TGAGTTGTGAGAAAAGGAG-ACAG-- 54727 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 |||||||| ||||||| ||||||||||| || || ||||||||| ||| |||| || Sbjct 54728 --GCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGCTCGTTGGAAAAGGTCAAGC 54785 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC-AAAGCTGCCCGAAAAGAAC 120762 ||||||||| || |||||| |||| |||| || ||||| | | ||| || Sbjct 54786 CGGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGCACCACTGAAA-AAG 54844 Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822 | ||| || || ||| || ||||| | |||| || ||||| | | | | | Sbjct 54845 ATGCCTTCGACAGCGGCGAATGCGACTAGGCGCGACGCGAACGTAGAATTGTCATCGCAG 54904 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||||||||| ||||| || ||||| ||||| | ||| || Sbjct 54905 ATCCACTTCAATGCCCAGTCAGCCTTCTTGCGAATGCAGGG 54945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417506695800