Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq18 102 5e-17 >seq18 Length=328773 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||||| ||||| || || ||| ||| || || |||||||| ||||| Sbjct 244389 ACCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 244330 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| |||| || | || || ||||||||||||| ||||| || ||| | || Sbjct 244329 CAATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGG 244270 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | || | ||| | |||||| || |||| Sbjct 244269 GATGCCCTCCTTGTCCTGGATCTT-GGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCA 244211 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| || || || || || |||||||||||| Sbjct 244210 CCTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCATA 244161 Score = 84.2 bits (92), Expect = 1e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| || ||||| || || |||| || | ||||| ||||| || Sbjct 244124 TCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 244065 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||||||||||||| || | || | ||||| ||||| ||| || || | |||| Sbjct 244064 ATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTT-GGTCTTCACATT 244006 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| | ||||||||| || || || || | ||||| || || || || Sbjct 244005 GTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 243958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701816686400