Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq171 96.9 5e-14 >seq171 Length=70297 Score = 96.9 bits (106), Expect = 5e-14 Identities = 191/276 (69%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 1455785 ATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA 1455844 |||||| || |||||| |||||| || ||||| ||||| ||| | || ||| | || Sbjct 55322 ATGTAC-AAGAAGGCCATGGCCTCATTCTGGACTGCCGAAGAGATTGATCTCTCCAAAGA 55264 Query 1455845 CACGGTCCA--CTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTC 1455899 | |||| |||| ||| | | ||||||||| ||| |||||| ||| || Sbjct 55263 T--GTTCCAGACTGGAACAACCGCCTCAACGACGACGAACGCTTCTTCATCTCCCACATC 55206 Query 1455900 CTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTAT 1455959 ||||| || || ||| || || ||||| || |||||||| || || || | Sbjct 55205 CTCGCATTCTT-CGCAGCATCGGACGGCATTGTCAATGAGAACCTTCTCGAGCGATTCAG 55147 Query 1455960 GAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAA 1456019 || || ||||| | ||||| || || | || ||||| |||||||||||||| || || Sbjct 55146 CAATGAAGTCCAGGTTCCAGAAGCTCGATGCTTCTACGGTTTCCAGATCGCCATGGAGAA 55087 Query 1456020 CATCCACTCTGAAACCTACTCGCTCCTGATCGACAC 1456055 || ||||| || || ||||| || || ||||| || Sbjct 55086 TATTCACTCCGAGACATACTCCCTTCTCATCGAGAC 55051 Score = 86.0 bits (94), Expect = 9e-11 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || ||||| |||||||| ||||||||||| | | || || || || || || Sbjct 54933 AAGAAGGCTGACTGGGCATTGAAGTGGATCTGCGATGACAAT-TCTACG-TTCGCGTCGC 54876 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | || |||| || ||||| ||||| |||||||||||| || |||| |||| | Sbjct 54875 GCCTAGTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTCGCATCCATTT 54816 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGT 1456301 | ||||||||||| || || ||||||||||| ||| |||| |||||| | ||| | Sbjct 54815 TCTGGCTCAAGAAACGTGGTCTCATGCCCGG-CTTGACCTTTTCCAACGAGCTCATCTCT 54757 Query 1456302 CGCGACGA 1456309 |||||||| Sbjct 54756 CGCGACGA 54749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177758633748290