Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18 129 5e-25 >seq18 Length=328773 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || |||||||| |||| ||| || || |||| || Sbjct 244370 ACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCCTCG 244311 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| |||| ||||| ||||| | || | || |||||||||| | Sbjct 244310 AGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGG 244251 Query 35648 ATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | ||||| || |||||||||| || || || || Sbjct 244250 ATCTTGGTCTTGAC-GTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTT 244192 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||| || ||||| || |||||||| Sbjct 244191 ACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | |||||| |||| || ||||| || || || || Sbjct 244124 TCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 244065 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||||| || | | |||||||| ||||| ||||| | | Sbjct 244064 ATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGTCTTCACATTG 244005 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | |||||||| || || ||||| | ||||| || || || |||| Sbjct 244004 TCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 243956 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || || || |||||| ||||||||||||||| ||| || || | || || Sbjct 244599 CACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTC 244540 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | ||||| ||||| | |||| | |||||||||| Sbjct 244539 CAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTG 244480 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| || ||| | |||| | | ||| ||| ||||| || || | ||| || || | Sbjct 244479 GATTTTCGTCTTGA-CGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCT 244421 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | ||| || || || || ||||| Sbjct 244420 TGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790528968600