Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq18 131 2e-25 seq13 93.3 4e-14 seq16 87.8 2e-12 >seq18 Length=328773 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| |||||||| ||||| || |||||||||||| Sbjct 244388 CCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 244329 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| ||||| |||||||||| ||||| || || || || Sbjct 244328 AATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGG 244269 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || ||||| Sbjct 244268 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCACC 244209 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 244208 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||||||||| || ||||||||||| | ||| | ||| ||| Sbjct 244142 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCG 244083 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||||||||| || || |||||||||||||| || || || || ||||| || |||||| Sbjct 244082 AGCTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGA 244023 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||| || || || ||||| || ||||| || Sbjct 244022 ATCTTGGTCTTCACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTG 243963 Query 134685 CCGGT 134689 || || Sbjct 243962 CCAGT 243958 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 || || | ||| | ||| | || || ||||| ||||||||||| |||| ||||| | | Sbjct 244607 AGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACG-TACG 244549 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || | || || || || || || | ||||| || || || || || || || Sbjct 244548 TCCATCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTC 244489 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || ||||| ||||| ||| | || ||||| ||||| || ||||| || Sbjct 244488 CTTGTCCTGGATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGT 244429 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || ||||| | ||| || |||||||||||||| Sbjct 244428 AATGGTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 >seq13 Length=375566 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 134520 GATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCA 134579 ||| |||| || ||||||||||||| | ||| | || || | || || || || Sbjct 315037 GATACCTTCTGGATGTTGTAGTCGCTCAAAGTGCGTCCATCCTCTAATTGCTTCCCGGCG 314978 Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639 || ||||| ||||| ||||| || || || |||||||| ||||| || || |||||| Sbjct 314977 AAGATCAACCGCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGTATCTTGGTTTTGACA 314918 Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 || | ||||| || || || || || ||||| ||||| || || |||| || || Sbjct 314917 TTATCGATGGTGTCTGAGGACTCAACCTCAAGAGTTATGGTCTTTCCCGTTAGGGTCTTG 314858 Query 134700 ACGAAA 134705 |||||| Sbjct 314857 ACGAAA 314852 >seq16 Length=359911 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 ||||| | |||||||| || || || |||||||| |||||||||||| | ||| | Sbjct 61091 AGTCGGAGAACGAGGTGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGGATAGAGTGCGG 61150 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || ||||| || ||||| || ||||| || || || || ||||| Sbjct 61151 CCGTCCTCGAGCTGCTTTCCTGCGAAGATCAAGCGTTGCTGGTCTGGAGGAATCCCTTCC 61210 Query 134616 TTTTCT 134621 || ||| Sbjct 61211 TTGTCT 61216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394956973400