Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq268 122 7e-23 >seq268 Length=30626 Score = 122 bits (134), Expect = 7e-23 Identities = 297/446 (67%), Gaps = 7/446 (2%) Strand=Plus/Minus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 || ||||| |||| ||| || ||||||||||||| |||||||| |||| || || | | Sbjct 27746 GGGCACATCAGCGTCCATTCGGCGTTCTGTTCAACACGCTTCATGAACAGGTCTGGAATC 27687 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || || ||||| || ||||| | ||| ||||||| |||| | ||| ||| Sbjct 27686 CACAAGGCGTAGAAAAGATCACGAGCACGCGCCTCTTCTTTACCGTGGTTCTTTCTCAGG 27627 Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794 | || ||| || ||||| |||||||| || |||| ||| | ||| | || || Sbjct 27626 TCCAACCAGTTGAAGATGTCGGCATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGA 27567 Query 131795 CGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851 ||| || || || || | ||| | ||| | | | | | || || | ||| || Sbjct 27566 CGCTTGTTTCCACCCTGGTCAACGTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGA 27507 Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911 | | || |||| | || || || | |||||| ||| |||||| ||| | Sbjct 27506 ACTAGTCCATTGGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGG 27447 Query 131912 TGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970 || |||||||| ||||| || || || || ||| ||||| | || || | | ||||| Sbjct 27446 TGCACGTTGAGACCAATGCCGCCAGCGGTCTTT-GAGATCATAGCACAAGTTTTGAGAGT 27388 Query 131971 GTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTG 132030 || |||||||| || | ||||||| | ||||| || | |||||| ||||| | || Sbjct 27387 GTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTG 27328 Query 132031 TTGGTGAAATGTGCCGGC--TGAAAA 132054 | ||| |||||| || |||||| Sbjct 27327 CGGTTGAGGTGTGCCTGCATTGAAAA 27302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931577506040