Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq268 178 2e-39 seq171 118 1e-21 seq17 107 2e-18 >seq268 Length=30626 Score = 178 bits (196), Expect = 2e-39 Identities = 1081/1704 (63%), Gaps = 103/1704 (6%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| ||||||| ||||| | || || || || || |||||||| ||| | Sbjct 27187 CCACAACACATGATCATGCGTGTGGCTGTTGGCATCCACGGAGAGGACATTGAAGCTGCC 27246 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | |||| ||| || | |||||| ||| || |||| || || | || ||||| | Sbjct 27247 ATTCAGACTTACAACTACATGTCCAGCAAA-TAC-TTCACGCATGCTTCGCCTACCCTTT 27304 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||| || ||||| ||| ||| | ||| ||||| ||| | | || ||||||| Sbjct 27305 TCAATGCAGGCACACCTCAACCGCAACTTTCCTCCTGCTTTCTTGTTGACATGAAGGAGG 27364 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||| | ||||| | ||||| ||||||||| |||| Sbjct 27365 ACAGCATTGAGGGTATCTACGACACTCTCAAAACTTGTGCTATGATCTCAAAGACCGCTG 27424 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | || ||||| | || | || | |||||| | ||| ||| | || |||| Sbjct 27425 GCGGCATTGGTCTCAACGTGCACCGCATCCGAGCCACTGGATCATACATTGGAGGAACAA 27484 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || ||| |||| | |||| ||||| || || || | || || || ||||| | Sbjct 27485 ACGGCACATCCAATGGACTAGTTCCTATGCTCCGTGTTTTCGATGCGACTGCTCGCTACG 27544 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||||| || | ||||| ||||||| |||||||||| Sbjct 27545 TTGACCAGGGTGGAAACAAGCGTCCT---GGTGCGTTCGCAATCTATCTGGAGCCATGGC 27601 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 | || || ||| | | | | || || | ||||| ||| | || |||||||| | Sbjct 27602 ATGCCGACATCTTCAACTGGTTGGACCTGAGAAAGAACCACGGTAAAGAAGAGGCGCG-T 27660 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || ||||| |||| ||| | ||||||||||| || ||||||||| | ||||| || Sbjct 27661 GCTCGTGATCTTTTCTACGCCTTGTGGATTCCAGACCTGTTCATGAAGCGTGTTGAACAG 27720 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | | | | ||| | || | || || || || ||||| || |||| | || Sbjct 27721 AACGCCGAATGGACGCTGATGTGCCCTCACGAGTGCCCTGGCCTTGCCGAAGTATATGGC 27780 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGA-AG-AAGGTCGGGCGAC-----TGC 104865 || || | || ||||| ||| |||||| | || || | || | | ||| ||| Sbjct 27781 GACGAATACGAGGCCCTATACGAAAAGTAAGTTGACAGTGAAGT-GTGTGACATTGGTGC 27839 Query 104866 GA--CGGTGCCAGCT------------GCCG-------------ATGTGTG---GAAAGC 104895 | | | |||| | |||| || ||| ||||| Sbjct 27840 TAACAGCTTCCAGGTATGAGAAAGAAGGCCGTGGTCGCGAGACTATTCGTGCCCAAAAGC 27899 Query 104896 T----------ATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAA 104944 | ||||| |||| | || ||||||||||| | || | |||||| |||||| Sbjct 27900 TTTGGTATGCCATTCTACAAG-CCCAGACCGAGACTGGCAATCCTTTCATGCTCTACAAA 27958 Query 104945 GACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTC 105004 |||||||| || | ||||| || || ||||| |||| || || || ||| | Sbjct 27959 GACGCCTGCAATCGGAAGAGCAACCAGAAGAACCTGGGAACCATTCGCAGCTCTAATTTG 28018 Query 105005 TGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCA 105064 || || || ||| | || | | | ||||||| ||||| || ||| | ||||| Sbjct 28019 TGCACCGAGATCATTGAGTACTCTGCACCAGATGAGGTTGCTGTATGCAACTTGGCATCT 28078 Query 105065 ATCGCTCTCCCCAAGTATGTGGA--TCCAGAGACAAAGACATTTGATTATGAAAAACTCC 105122 || || || || | | ||| || |||| | | | | | |||| | || | | Sbjct 28079 ATGGCACTTCCGACCTTTGTTGACGTCCA-ACGCGGCGTC-TACGATTTCCAGAAGTTGC 28136 Query 105123 ACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 105182 |||||||||| | ||||||| | ||| | || | | |||||| ||| || | Sbjct 28137 ACGAAGTTACCCAGACTGTCATCCGCAACTTGAATAAGATCATTGATGTCAATCACTATC 28196 Query 105183 CCGTTGAGACTG-CTCGTAAATC--TAATATGAGACACCGTCCAATTGGTCTCGGTGTTC 105239 | ||| ||| | || | | || | || |||||| | || | || || | Sbjct 28197 CTGTT---CCTGAAGCATACAACAGCAACTCCCGTCATCGTCCAGTCGGAGTTGGCGTAC 28253 Query 105240 AGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 105296 ||||||| || |||| ||| | ||| ||| | | || || || ||||| | Sbjct 28254 AGGGTCTTGCTGATGCTTTCCTCGCGCTTCGTCTGC---CTTTCGAGTCTCCTGAAGCAA 28310 Query 105297 AGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTT--- 105353 || | ||||| | || || || ||||| || ||||| || ||||| | || Sbjct 28311 AGAAGCTCAATATTCAAATCTTCGAAACCATTTACCACGCTGC-CTTGA--CCTCTTCCT 28367 Query 105354 -CAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412 || | || ||| | | || ||| | || || ||| |||| ||||||| || ||| Sbjct 28368 GCAAACTT-GCACAAGAAGAGGGTACGTACCAATCCTACAAGGGCTCTCCAGTATCGCAA 28426 Query 105413 GGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGGAAGC 105471 || | || |||| ||| |||| |||| || | ||||| || || |||||||| | Sbjct 28427 GGTATCCTACAATATGACATGT-GGAACGTCACACCAACAGATCTCTGGGACTGGGATTC 28485 Query 105472 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCC 105531 ||||||| || || || | || | || ||| || | |||| |||||||| Sbjct 28486 GCTCAAGGCTGATATAAAAAAGCACGGCGTCCGCAACTCGCTTTTAGTGGCCCCAATGCC 28545 Query 105532 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 105591 ||| |||||||| | ||||| |||| ||||| || || ||||| || ||| |||| Sbjct 28546 AACTGCCTCCACATCTCAAATTCTGGGCTTCAATGAGTGTTTCGAACCATATACGTCGAA 28605 Query 105592 CATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGT 105648 |||||| || | || | || || || || || | |||||| ||| || | Sbjct 28606 CATCTA-CTCACGACGTGTGCTTGCTGGCGAATTCCAAGTCGTCAAC--CCATGGCTACT 28662 Query 105649 GGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGC 105708 | || ||| ||||| ||||||||||| | |||||||| ||| ||| | | Sbjct 28663 CAAGGATCTCGTCGAGATGGGTCTCTGGTCTGACAATATGAAGAATCGCATCATTGCCGA 28722 Query 105709 GGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCAC 105768 ||||||||| |||||||| ||| | || || |||| || ||| | ||| || Sbjct 28723 GGGTGGTTCTATTCAAAACATTCCCAACATCCCCGATGACATCAAGGCTCTCTACAAGAC 28782 Query 105769 AGTTTGGGAAATCAAGATGAAGGATGTCAT--TGAC-ATGGCCGCAGATCGTGGTCGCTT 105825 || ||||| |||| | || | | ||| | || |||||||| ||||||||| || Sbjct 28783 CGTCTGGGAGATCA--GTCAACG-TACCATCATCACAATGGCCGCCGATCGTGGTGCGTT 28839 Query 105826 CATTGATCAAAGTCAAAGTATGAA 105849 || |||||| ||| || |||| Sbjct 28840 TATCGATCAATCTCAGAGCTTGAA 28863 >seq171 Length=70297 Score = 118 bits (130), Expect = 1e-21 Identities = 332/502 (66%), Gaps = 12/502 (2%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 94789 |||| || || |||| ||||| || || ||||| |||||||| | ||| || | Sbjct 54950 CAGTCCCCTGCATTCGCAAGAAGGCTGACTGGGCATTGAAGTGGATCTGCGATGACAATT 54891 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | | || || ||| || ||||||| || ||| || || ||||| ||| || Sbjct 54890 C---TACGTTCGCGTCGCGCCTAGTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTG 54834 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || | ||| | |||| ||||||||||| || ||||||||||| || | ||| | Sbjct 54833 GTGCTTTCGCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCCGGCTTGACCTTTT 54774 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCA 94969 |||||||||| |||||||| ||||||||| | ||| || ||||| |||||| Sbjct 54773 CCAACGAGCTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGTCTCCTTTTCT 54714 Query 94970 AATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTG 95029 | | | | || || | |||| || | | | || | | ||| || ||| Sbjct 54713 CACAACTCAACAAGAAGCCTGCTCCTGAAGCTGTCCGCGCCATCATCACGGAGGCAGTTC 54654 Query 95030 AGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTG 95089 | |||||| ||| |||| | || || || |||||| || |||| |||||||| | Sbjct 54653 AAATTGAGCAAGAATTCTTGAGCGAGGCACTACCATGCAGACTGCTCGGCATGAATTCAG 54594 Query 95090 AAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTG-AAGCAGATCGG-GGT 95147 |||| |||| ||||||| ||| ||||| | | ||| ||| |||| | Sbjct 54593 GGCTCATGTGCCAATACATTGAGTTTGTCGCTGATCGTCTCTTGCTTGCA-CTCGGCAAT 54535 Query 95148 GCCTCCA-ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACG 95206 | || | | | || | |||||| || ||||||||||||||||| |||| || Sbjct 54534 G--TCAAGGTCTATAATGCTGTGAATCCCTTCGACTTCATGGAGAACATCTCTCTCGCCG 54477 Query 95207 GGAAGACAAACTTCTTCGAAAA 95228 | |||||||| |||||||| || Sbjct 54476 GAAAGACAAATTTCTTCGAGAA 54455 >seq17 Length=345208 Score = 107 bits (118), Expect = 2e-18 Identities = 352/531 (66%), Gaps = 21/531 (4%) Strand=Plus/Minus Query 9487 GCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGACGAAG 9546 |||||| ||||| || |||| || | || || || ||||| || || || || Sbjct 152034 GCGTCCACGAACGTCCGGTAGAGGGACGTTGACGTTGCGGTCAAAACGGCCAGGTCGGGT 151975 Query 9547 GAGCGCGTCATCAAG-GATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTT 9605 ||||||| ||| || ||| || | ||| || || || |||| | ||| || || Sbjct 151974 GAGCGCGCTATCGAGAGAT-TCGGGGAAATTGGTGGCTGCAATGATGATAATGCCGCTTC 151916 Query 9606 CATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCAT 9665 | | ||||| || || | || ||||| |||||||| | |||||| | | ||| Sbjct 151915 CTTGGTCAAATCCGTCGAGTTCGGTCAAGAGTTGGTTGAGAGTTTGCTTCG------CAT 151862 Query 9666 TCGCTGGCATACCACCAGCACTGCG-TTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9724 || | ||| | | | | | || |||| | || | ||||| | ||| || |||||| Sbjct 151861 AAGC-GCCAT--CGCGTGGATTCCGCTTGCCT-CCTATCGCATCCAACTCGTCGATGAAG 151806 Query 9725 ACGAT-GCATGGTTGATTTT-CGCGAGCGACTTCA-AAGAGATCCCGTACACGCTTGGCG 9781 | ||| ||| || || ||| |||| || ||| ||||| ||||| |||||||| ||| Sbjct 151805 ATGATAGCAGGG--GACTTTGCGCGTGC-ACTCGTGAAGAGCTCCCGAACACGCTTCGCG 151749 Query 9782 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTA 9841 || ||||||||| |||| || | || | | |||| | || ||| || || Sbjct 151748 CCGACACCAACATACATTTCGTCGAATTCCGACCCGGACGCATAGAAGAAAGGAACGCCG 151689 Query 9842 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 9901 | |||||| || | ||||| || || |||||||| || ||||| ||| ||| | || Sbjct 151688 GCTTCACCGGCGACTGCTCGTGCAAGTAGAGTCTTGCCAGTACCAGGCGGACCAACAAGC 151629 Query 9902 AGGGCACCTCGTGGAATCTTGGCGCC-ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAA 9960 || |||| ||||| ||| |||| | || || | | | ||| | ||| || || Sbjct 151628 AGAACACCCTTTGGAAGCTTACCGCCCAGCGCCGAAAATTGTTT-AGGATCCTTCAGGAA 151570 Query 9961 ATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 10011 |||| | |||| |||||| |||||||| | || ||||||||||| Sbjct 151569 TGCCACCAGCTCTTGCAATTCTTCTTTGGCCTCATCGCAACCCTCAACATC 151519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256826535800