Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq268 168 7e-37 seq171 84.2 2e-11 >seq268 Length=30626 Score = 168 bits (186), Expect = 7e-37 Identities = 385/569 (68%), Gaps = 8/569 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || || | || |||||||| || ||| | | || || | | |||| ||| Sbjct 27200 TCATGCGTGTGGCTGTTGGCATCCACGGAGAGGACATTGAAGC-TGCCATTCAGACTTAC 27258 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| ||| | || ||||| ||||| || |||| ||||| ||||| || || || Sbjct 27259 AACTACATGTCCAGCAAATACTTCACGCATGCTTCGCCTACCCTTTTCAATGCAGGCACA 27318 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 ||| || || | || |||||| || || | |||||||| ||| || || || Sbjct 27319 CCTCAACCGCAACTTTCCTCCTGCTTTCTTGTTGACATGAAGGAGGACAGCATTGAGGGT 27378 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || ||||| ||||| ||||| ||| | || || || ||| || Sbjct 27379 ATCTACGACACTCTCAAAACTTGTGCTATGATCTCAAAGACCGCTGGCGGCATTGGTCTC 27438 Query 53432 CAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || ||| | | |||| || | || || || || || |||||| || | Sbjct 27439 AACGTGCACCG-CATCCGAGCCACTGGATCATACATTGGAGGAACAAACGGCACATCCAA 27497 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 |||| | || ||||||||||| || ||| | || || || ||||| |||||||||| Sbjct 27498 TGGACTAGTTCCTATGCTCCGTGTTTTCGATGCGACTGCTCGCTACGTTGACCAGGGTGG 27557 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || ||||||| ||||| || ||||| ||||| |||||||| | | Sbjct 27558 AAACAAGCGTCCTGGTGCGTTCGCAATCTATCTGGAGCCATGGCATGCCGACATCTTCAA 27617 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 | | || ||| | ||| || ||| | |||||| ||| ||| ||||| || || | Sbjct 27618 CTGGTTGGACCTGAGAAAGAACCACGGTAAAGAAGAGGCGCG-TGCTCGTGATCTTTTCT 27676 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||| ||||| |||||| | || || || ||| || ||| Sbjct 27677 AC-GCCTTGTGGATTCCAGACCTGTTCATGAAGCGTGTTGAACAGAACGCCGAATGGACG 27735 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCT 53757 ||||||||||| |||||||||| ||||| Sbjct 27736 CTGATGTGCCCTCACGAGTGCCCTGGCCT 27764 >seq171 Length=70297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||| | | ||| ||||| || ||||| ||||| | ||| || |||| | Sbjct 54767 TCGTTGGAAAAGGTCAAGCCGGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCG 54826 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || | ||||||||| ||||||||||||||| || || ||||| ||||| ||||||| Sbjct 54827 AAAGCACCACTGAAAAAGATGCCTTCGACAGCGGCGAATGCGACTAGGCGCGACGCGAAC 54886 Query 74910 G 74910 | Sbjct 54887 G 54887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212272091000