Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq268 145 1e-29 >seq268 Length=30626 Score = 145 bits (160), Expect = 1e-29 Identities = 450/690 (65%), Gaps = 10/690 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || | |||||||||| | ||| || | | | | ||| || ||||| Sbjct 27761 CCAGGGCACTCGTGAGGGCACATCAGCGTCCATTCGGCGTTCTGTTCAACACGCTTCATG 27702 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| | || || ||||| || | | ||||| || || Sbjct 27701 AACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGCGCCTCTTCTTTACCG 27642 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | || || | | | | || || | ||||||||| || ||||| ||| Sbjct 27641 TGGTTCTTTCTCAGGTCCAACCAGTTGAAGATGTCGGCATGCCATGGCTCCAGATAGATT 27582 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || ||||| || | || | || || || || Sbjct 27581 GCGAACGCACCAGGACGCTTGTTTCCACCCTGGTCAACGTAGCGAGCAGTCGCATCGAAA 27522 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| | || || ||||| || |||||||| ||| || |||| Sbjct 27521 ACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGTTCCTCCAATGTATGATCCA 27462 Query 78255 CTTGCGCGAATAT--TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || || || | | | || | || || || || || |||| || || | || Sbjct 27461 GTGGCTCGGATGCGGTGCACGTTGAGA--CCAATGCCGCCAGCGGTCTTTGAGATCATAG 27404 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | ||| ||| | || |||||||||||||| || ||||| ||| |||||| || ||||| Sbjct 27403 CACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACAAGAA 27344 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 | ||| || | ||| | ||| || |||||||| || | || || || ||||||| Sbjct 27343 AGCAGGAGGAAAGTTGCGGTTGAGGTGTGCCTGCATTGAAAAGGGTAGGCGAAGCATGCG 27284 Query 78433 TAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGA 78491 | || |||| || | |||| ||||| || | ||| || | ||| |||||| | Sbjct 27283 TGAAGTATTTGCTGGACATGTAG-TTGTAAGTCTGAATGGCAGCTTCAATGTCCTCTCCG 27225 Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || || || || || |||||||| | ||| || || || | ||| | ||| || Sbjct 27224 TGGATGCCAACAGCCACACGCATGATCATGTGTTGTGGACGCTCAGCGACCTTGCCGCTT 27165 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 78609 ||| || | ||| ||| || | || || || ||||| || | ||| ||||| | Sbjct 27164 ATTCGCAGTAGGTACGATCGCTCAAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--T 27107 Query 78610 CTCTCTCGTAAATAATAACAGAATTTAGTT 78639 |||| ||||| | ||| |||| || |||| Sbjct 27106 CTCTATCGTAGACAATGGCAGAGTTCAGTT 27077 Score = 129 bits (142), Expect = 8e-25 Identities = 369/564 (65%), Gaps = 5/564 (1%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| || | || || | | || || ||||||||||| ||||| || | Sbjct 28989 GTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAG 28930 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 |||| |||| || ||||||||| || | |||| |||| || || Sbjct 28929 CCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATG 28870 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| |||| |||| ||||||||| || || || | ||| || |||||| | || Sbjct 28869 TGAATGTTCAAGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGATG 28810 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| |||| || ||||| | || ||| | | ||||| ||||| || | | Sbjct 28809 ATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGATG 28750 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | |||||||| |||||||| || | || || |||||| |||| ||| | Sbjct 28749 TTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGAC 28690 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | |||| | | | | || || || || || | ||| ||||| ||| Sbjct 28689 CAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCCA 28630 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | || | ||| || || ||||||||||| | | | |||||| ||| Sbjct 28629 GCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCCC 28570 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 77257 | |||||||| || || ||||||||||| || ||||| || || | | || | || || Sbjct 28569 AGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA-AAGCGAGTTGCGGACGCC 28511 Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 || || | || | | | || || | | ||| ||||| ||||||| ||| || | Sbjct 28510 GTGCTTTTTTATATCAGCCTTGAGCGAATCCCAGTCCCAGAGATCTGTTGGTGTGACGTT 28451 Query 77318 CCAAAGATCGTATTGTAGAATTCC 77341 ||| | || |||||||| || || Sbjct 28450 CCACATGTCATATTGTAGGATACC 28427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664067568800