Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq268 122 1e-22 >seq268 Length=30626 Score = 122 bits (134), Expect = 1e-22 Identities = 456/708 (64%), Gaps = 8/708 (1%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||||||||| || | || || | | || || ||||||||||| ||||| | Sbjct 28994 CAACAGTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCT 28935 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | | |||| |||| || ||||||||| || | |||| | || || Sbjct 28934 TCAAGCCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCT 28875 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || ||||| |||| |||| ||||||||| || || || | ||| || |||||| Sbjct 28874 TCATGTGAATGTTCAAGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTG 28815 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || ||||| |||| || ||||| | || ||| | | ||||| ||||| | Sbjct 28814 TGATGATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGG 28755 Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | || | | |||||||| || || || || | || || |||||| || | | Sbjct 28754 GGATGTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGT 28695 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 || ||| | ||||| | | | | || || || || || | ||| |||| Sbjct 28694 CAGACCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATT 28635 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | |||| | || | ||| | ||| || || ||||||||||| | | | |||||| Sbjct 28634 CGCCAGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGA 28575 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTG 75847 |||| |||||||| || || ||||| ||||| || ||||| || || | | || | | Sbjct 28574 AGCCCAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA-AAGCGAGTTGCGG 28516 Query 75848 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 | || || || | || | | | || || | | ||| ||||| ||||||| |||| Sbjct 28515 ACGCCGTGCTTTTTTATATCAGCCTTGAGCGAATCCCAGTCCCAGAGATCTGTTGGTGTG 28456 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTA-GCATATGATCCATTATATGTTTC 75966 || | ||| | || |||||||| || || |||| | | || || || || | || Sbjct 28455 ACGTTCCACATGTCATATTGTAGGATACC-TTGCGATACTGGAGAGCCCTTGTAGGATTG 28397 Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026 ||| || || || | || || |||| ||| | || ||| ||| ||||| || Sbjct 28396 GTACGTACCCTCTTCTTGTGCAAGTTTGCAGGAAGAGGTCAAGGCAGCGTGGTAAATGGT 28337 Query 76027 TTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGG 76074 |||||| || | |||| || | | |||||| || || ||||| Sbjct 28336 TTCGAAGATTTGAATATTGAGCTTCTTTGCTTCAGGAGACTCGAAAGG 28289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929543134400