Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13 107 4e-18 seq18 96.9 8e-15 >seq13 Length=375566 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| ||| ||||| | ||||| |||| |||||||||||||| Sbjct 315031 TTCTGGATGTTGTAGTCGCTCAAAGTGCGTCCATCCTCTAATTGCTTCCCGGCGAAGATC 314972 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | || ||| || || | | |||||||| || ||||| || || ||||||| | || Sbjct 314971 AACCGCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGTATCTTGGTTTTGACATTATCG 314912 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | | ||||||| ||| || |||||||| || || || ||||| || ||||| ||||| Sbjct 314911 ATGGTGTCTGAGGACTCAACCTCAAGAGTTATGGTCTTTCCCGTTAGGGTCTTGACGAA 314853 >seq18 Length=328773 Score = 96.9 bits (106), Expect = 8e-15 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || || || || ||||||||||| || | | |||| || || Sbjct 244146 GAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTC 244087 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| | | ||||||||||| | |||||||||||| || Sbjct 244086 CTCGAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTC 244027 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 |||||| || || ||| | || | | ||| ||| | ||| || || || || || Sbjct 244026 TTGAATCTTGGTCTTCACATTGTCGATGGTGTCGCTGGA--CTCAACCTCGAGGGTGATG 243969 Query 152070 GTTTTGCCCGT 152080 || ||||| || Sbjct 243968 GTCTTGCCAGT 243958 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || || |||||||||||| || || | |||||||| | ||||| | Sbjct 244586 GTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCCAATTGCTTT--C 244529 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | ||| ||||| | | || || ||||| || || ||||| | Sbjct 244528 CGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATTTTCGTCT 244469 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | || ||| || ||||| || ||||| || ||||| ||||||| Sbjct 244468 TGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTGCCGGTGAGAG 244409 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||| ||||| | ||||| Sbjct 244408 TCTTGACGAAAATTTGCAT 244390 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| |||| || || | || || || | Sbjct 244368 CAAG-TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCCTCGA 244310 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| || || || | ||| ||||| | | ||| || ||||| || || | Sbjct 244309 GCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGGA 244250 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| || ||| || || | ||||| || || | Sbjct 244249 TCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTTAC 244190 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| | ||||||||||||| |||||| Sbjct 244189 CCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153812743085695