Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq347 89.7 4e-13 >seq347 Length=198302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||||| | | ||||| ||||| ||||| Sbjct 169121 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCG 169062 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | | ||||||||| || | ||| |||||||| |||||| || Sbjct 169061 GCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 169002 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| |||| ||| ||||||||||| || || || Sbjct 169001 ACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTC 168942 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || |||||||| Sbjct 168941 TTGACGAAGATTTGCAT 168925 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||||| ||||| || |||||||| || ||||| ||||| Sbjct 170922 GTTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTC 170863 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || || | |||| |||| || || || || | || || | ||||||||| Sbjct 170862 GCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 170803 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | ||| || ||| || || Sbjct 170802 AGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTC 170743 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||| ||||||||||| | || || || || |||||||| Sbjct 170742 AACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | |||||||| ||||| || |||||||| || ||||| ||||| Sbjct 179823 GTTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTC 179882 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || || | |||| |||| || || || || | || || | ||||||||| Sbjct 179883 GCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 179942 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||||||||| |||||| || || | | ||| || ||| || || Sbjct 179943 AGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTC 180002 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||| ||||||||||| | || || || || |||||||| Sbjct 180003 AACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253991960592