Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq347 104 2e-17 seq249 91.5 1e-13 >seq347 Length=198302 Score = 104 bits (114), Expect = 2e-17 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGC 118592 ||| | ||| ||||| || || |||||||| || | | || | |||| |||||||||| Sbjct 169128 GTGAAGTGTGGACTCCTTCTGGATGTTGTAGTC--TGAGAGGGTGCGTCCATCCTCGAGC 169071 Query 118593 TGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAAT 118651 || || || ||| |||| | |||||||| || || || ||||||||||||| ||| | Sbjct 169070 TGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGA-- 169013 Query 118652 TTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || || | |||| |||||| | ||| ||||| | ||| | || |||| Sbjct 169012 TCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGC 168953 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| || || || || ||||| Sbjct 168952 CCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || || || |||||||| || || ||||| ||| ||| Sbjct 180073 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCG 180132 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| | |||||||| || || || || |||||||||||| | Sbjct 180133 AGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGA 180192 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||| | ||| | ||| || Sbjct 180193 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTT 180252 Query 118710 CCGGTCA 118716 ||||||| Sbjct 180253 CCGGTCA 180259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || || || |||||||| || || ||||| ||| ||| Sbjct 170672 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCG 170613 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 || || || || ||| |||| | |||||||| || || || ||||||||||||| ||| Sbjct 170612 AGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGG 170553 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || || || | |||| |||||| | ||| ||||| | ||| | ||| | Sbjct 170552 A--TCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCT 170495 Query 118708 TGCCGGTCA 118716 | ||||||| Sbjct 170494 TTCCGGTCA 170486 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 118575 GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATG 118634 ||||| |||||||||||| || || ||| |||| | |||||||| || || || || Sbjct 169316 GTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATT 169257 Query 118635 CCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG 118694 |||||||||||| ||| || || || | |||| |||||| | ||| ||||| Sbjct 169256 CCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCC 169197 Query 118695 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||| | || ||||| |||| ||| || || || || ||||| Sbjct 169196 AAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153 >seq249 Length=210267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 ||||| |||||||| ||||||| || || |||||| | || |||||||| |||| Sbjct 84120 TTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGATT 84179 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||||| || || || || || |||||||||||| || || || || | ||| Sbjct 84180 AATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCG 84239 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | ||||| | | ||||||||| | ||| | || ||||| || || ||||| || ||| Sbjct 84240 ATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAA 84299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825049244304