Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq347 95.1 1e-14 >seq347 Length=198302 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| |||||| || || ||||| || | || || || | || || |||||||| || Sbjct 169122 TGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCC 169063 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| || | ||||||||||| | || | || |||||||||| ||| || || Sbjct 169062 GGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 169003 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | ||||| || || || || | |||||||| |||||||| | | Sbjct 169002 GA-CGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAG 168944 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| || ||||||||||| Sbjct 168943 TCTTGACGAAGATTTGCAT 168925 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| ||||| || |||||| || || ||||| || || || || | Sbjct 170907 ACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCC 170848 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||||| || ||||| ||||| ||||||||||| | || | | ||||| Sbjct 170847 GTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTT 170788 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| ||||| || |||| || || Sbjct 170787 GTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 170728 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || ||||| || ||||||||||| Sbjct 170727 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| ||||| || |||||| || || ||||| || || || || | Sbjct 179838 ACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCC 179897 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | ||||| || ||||| ||||| ||||||||||| | || | | ||||| Sbjct 179898 GTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTT 179957 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| ||||| || |||| || || Sbjct 179958 GTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 180017 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || ||||| || ||||||||||| Sbjct 180018 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810366507360