Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq347 113 3e-20 >seq347 Length=198302 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| || || || ||||| |||||||||||| | Sbjct 170918 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 170859 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | ||| |||| ||||| ||||| || ||||| ||||| ||||||||||| || Sbjct 170858 AACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 170799 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | | || | || | ||||| || Sbjct 170798 ATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACT 170739 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || ||||||||||| || ||||| ||||| ||||| Sbjct 170738 TCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| || || || ||||| |||||||||||| | Sbjct 179827 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 179886 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | ||| |||| ||||| ||||| || ||||| ||||| ||||||||||| || Sbjct 179887 AACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 179946 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | || | | || | || | ||||| || Sbjct 179947 ATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACT 180006 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || ||||||||||| || ||||| ||||| ||||| Sbjct 180007 TCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || || | || || | ||||||||| ||||| Sbjct 169115 TCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAG 169056 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||||||||| || | || ||||||||| ||||| ||| | | | Sbjct 169055 ATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 168996 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || |||| |||||||| ||||| || | ||| || || Sbjct 168995 TCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACG 168936 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 168935 AAGATTTGCAT 168925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068015310720