Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq400 109 1e-18 >seq400 Length=377941 Score = 109 bits (120), Expect = 1e-18 Identities = 180/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| || ||||| ||||| || || || || ||| || || || || ||||| Sbjct 294614 GCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACC 294673 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGAC-TG 94903 ||| ||||| || || | | | | |||||||| || || ||||| ||| ||| || Sbjct 294674 CTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGT-TGAGGTG 294732 Query 94904 TTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCAT 94963 | || || || ||||| ||||| || || || || || | | |||||| | | Sbjct 294733 TGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTATTTGTTAGACATGTAGTTGT 294792 Query 94964 ATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 |||| | ||| |||||| ||||| ||||||||||||||| ||||||||||| |||| Sbjct 294793 ATGTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCA 294852 Query 95024 TGTCCTGAGGGCGCTCA 95040 | | || || |||||| Sbjct 294853 TATGTTGTGGACGCTCA 294869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571168806460