Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq400 93.3 6e-14 >seq400 Length=377941 Score = 93.3 bits (102), Expect = 6e-14 Identities = 341/528 (65%), Gaps = 7/528 (1%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| || ||||| || || || | | || || || ||||||||||| || || ||| Sbjct 293058 GTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGA 293117 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||| ||||| || | ||| |||| ||| || Sbjct 293118 CCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATG 293177 Query 64959 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017 || || |||| || | ||| |||||| |||||||| || | || |||||||| | || Sbjct 293178 TGAATGTTCA-AGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT 293236 Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 65077 || || || |||||||||| || || |||| || ||||| || |||| Sbjct 293237 AATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCTTTGATATCATCGGGAAT 293296 Query 65078 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 65134 || | | ||||| || || ||||| ||||| || || | |||||| || | || Sbjct 293297 ATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGA 293356 Query 65135 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194 ||| | ||||| | | || | || || || || || ||||| ||||| || Sbjct 293357 CCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCC 293416 Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254 || | || | |||| ||| ||||| || || || || | |||| || || Sbjct 293417 AGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACC 293476 Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 65313 | |||||||| || || ||||| |||||||| | || ||| || | || | || || Sbjct 293477 GAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAGAAGTGAGTTGCGAATAC 293535 Query 65314 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 65361 ||| | |||| | | | || || | ||||| | ||| ||||||| Sbjct 293536 CGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCCG 293583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164474114080