Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq400 96.9 5e-15 seq721 91.5 2e-13 >seq400 Length=377941 Score = 96.9 bits (106), Expect = 5e-15 Identities = 364/565 (64%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || ||||| || || || | | || || || ||||||||||| || || ||| Sbjct 293058 GTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGTCTTGAGA 293117 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || || ||||| || | ||| |||| ||| || Sbjct 293118 CCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGCCCATGGTCGGCTCTTTCATG 293177 Query 78838 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 || || |||| || | ||| |||||| |||||||| || | || |||||||| | || Sbjct 293178 TGAATGTTCA-AGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGAT 293236 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 || || || |||||||||| || || |||| || ||||| || |||| Sbjct 293237 AATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCTTTGATATCATCGGGAAT 293296 Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 || | | ||||| || || ||||| ||||| || || | |||||| || | || Sbjct 293297 ATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGA 293356 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | ||||| | | || | || || || || || ||||| ||||| || Sbjct 293357 CCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCC 293416 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || | || | |||| ||| ||||| || ||||| || | | || || || Sbjct 293417 AGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACC 293476 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 79192 | |||||||| || || || ||||||||||| | || ||| || | || | || || Sbjct 293477 GAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAGAAGTGAGTTGCGAATAC 293535 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| |||| | | | || || || ||||| ||||| ||||| | || || | Sbjct 293536 CGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAGATCCGTAGGAGTGACGT 293595 Query 79253 TCCAAAGATCATATTGTAGAATACC 79277 |||| | || || || |||||||| Sbjct 293596 TCCACATGTCGTACTGGAGAATACC 293620 >seq721 Length=773014 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||| |||||||| | | || ||||||||||| || || | Sbjct 707839 CAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAAG 707898 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || || ||||| || ||||| || || || ||||| | || |||||| Sbjct 707899 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAG 707958 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---GT 50136 || || || || || || || || || || | | | || | | | | |||||| Sbjct 707959 ATACCCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAGTTGTCATCGCAA 708018 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 |||||||| | ||||| ||||||||||| Sbjct 708019 ATCCACTTCAGTGCCCAGTCGGCCTTCTT 708047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259713899680