Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq347 100 7e-16 >seq347 Length=198302 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || || || ||||| || || ||||| | || | |||||||| | ||| Sbjct 170894 TGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGC 170835 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| || || || || | ||| || || ||||| || ||||| || ||||| ||||| Sbjct 170834 TTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTC 170775 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | ||| || | ||| || || |||||||||||||| || || Sbjct 170774 GTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTG 170715 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| Sbjct 170714 AGGGTCTTCACGAAGATTTGCAT 170692 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || || || ||||| || || ||||| | || | |||||||| | ||| Sbjct 179851 TGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGC 179910 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| || || || || | ||| || || ||||| || ||||| || ||||| ||||| Sbjct 179911 TTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTC 179970 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | ||| || | ||| || || |||||||||||||| || || Sbjct 179971 GTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTG 180030 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| Sbjct 180031 AGGGTCTTCACGAAGATTTGCAT 180053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151383470680496