Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq347 89.7 4e-13 >seq347 Length=198302 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068 ||| | || ||||| |||| ||| | || || ||| | | |||||||||||| | ||| Sbjct 170482 ACAGTGACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTC 170541 Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128 || ||||| ||||| || ||||| || || || || ||| | |||| | || | Sbjct 170542 AAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGCTTGATCTTCGCC 170601 Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 ||||||||||||||||||| | | | | | || || ||||| || || ||||| || Sbjct 170602 GGCAAGCAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCAC 170660 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068 ||| | || ||||| |||| ||| | || || ||| | | |||||||||||| | ||| Sbjct 180263 ACAGTGACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTC 180204 Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128 || |||||| ||||| || || || || || || || ||| | |||| | || | Sbjct 180203 AAGACCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCC 180144 Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 ||||||||||||||||||| | | | | | || || ||||| || || ||||| || Sbjct 180143 GGCAAGCAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCAC 180085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930697276860