Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31]
1,012 sequences; 55,125,376 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq721 138 1e-27
seq347 123 2e-23
seq400 105 6e-18
seq825 98.7 9e-16
>seq721
Length=773014
Score = 138 bits (152), Expect = 1e-27
Identities = 347/513 (68%), Gaps = 11/513 (2%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | |||||||| |||||||||| |||||||||| | || | | ||
Sbjct 708059 CCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAACTCTACC 708000
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|| || |||| | || || || || ||| ||||| |||| || ||| |||
Sbjct 707999 TTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTT 707940
Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265
|| | ||||| | |||| || | || | ||||||||||| |||| || ||||||
Sbjct 707939 GCATCTATCTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGCTTGACCTTCTCCAACGA 707881
Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCG 46325
|| || || ||||||||||| |||| || |||||||| || ||| || | ||| |
Sbjct 707880 ACTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCT-TCTCAC-AG 707823
Query 46326 CGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCAT 46385
| | || | |||| | |||| || |||| | ||| ||| ||||| || ||
Sbjct 707822 C-TCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAAT 707764
Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCC-CGCTGCCCTGCTGGGCATGAACGC-ACAG 46443
|||| |||| || || | | ||| | || || | |||| ||||||||| | ||
Sbjct 707763 TGAGCAGGAATTCTTGAGCGAAGCATTACCATGCAG-ATTGCTCGGCATGAACTCTACCC 707705
Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT-CGTGCAGCTTCACCAGCC 46502
|| |||||| | |||||||||||||| || || || || | | ||| |||| | |
Sbjct 707704 TC-ATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGC-GCTTGGCAATGT 707647
Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562
||| || |||| ||| || || || || ||| | |||||||| || | || ||
Sbjct 707646 TAAGGTTTACAACGCCGTCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGGAAA 707587
Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
||||| |||||||| ||||||||||| || ||
Sbjct 707586 GACTAACTTTTTCGAGAAGCGCGTCGGTGATTA 707554
>seq347
Length=198302
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||| ||||| || || | |||||||||||| || |||||||| |||||
Sbjct 170919 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCT 170860
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || ||| || | ||||| || ||| |||| | ||||||||||| |||||
Sbjct 170859 CAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGG 170800
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| ||| ||||| | || | || || | ||| || |
Sbjct 170799 AATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAAC 170740
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || ||||| || || || ||||| || |||||
Sbjct 170739 TTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||| ||||| || || | |||||||||||| || |||||||| |||||
Sbjct 179826 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCT 179885
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || ||| || | ||||| || ||| |||| | ||||||||||| |||||
Sbjct 179886 CAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGG 179945
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| ||| ||||| | || | || || | ||| || |
Sbjct 179946 AATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAAC 180005
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || ||||| || || || ||||| || |||||
Sbjct 180006 TTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || | |||||| ||||| |||||||||||
Sbjct 169121 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCG 169062
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| || ||||||||||| || ||||| || || ||||| ||| || ||||
Sbjct 169061 GCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 169002
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | ||||| | || | ||| | ||| || || || | |||
Sbjct 169001 ACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTC 168942
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 168941 TTGACGAAGATTTGCAT 168925
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || || || | || || ||||| || |||||||| || |
Sbjct 180055 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 180114
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || || |||||||| ||| |||| || ||||||||||| || |||
Sbjct 180115 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 180174
Query 131128 ATTCCTTCTTTGTC 131141
||||| || |||||
Sbjct 180175 ATTCCCTCCTTGTC 180188
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || || || | || || ||||| || |||||||| || |
Sbjct 170690 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 170631
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || || |||||||| ||| |||| || ||||||||||| || |||
Sbjct 170630 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 170571
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 170570 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACC 170511
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | || || |||||
Sbjct 170510 TCAAGGGTGATCGTCTTTCCGGT 170488
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| |||| || ||||||||||| || |||||||| || |||
Sbjct 169307 TCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTG 169248
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| || || ||||| | || | || || | ||||| | || | ||| | |
Sbjct 169247 TCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATG 169188
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || | ||| || ||||| || |||||
Sbjct 169187 GTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153
>seq400
Length=377941
Score = 105 bits (116), Expect = 6e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|||||||| || || || || || | ||||||||| | || | || |||||| | ||
Sbjct 293397 TTGACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGC 293456
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| || || ||||||| || | || || ||||| || ||
Sbjct 293457 TCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAGCAACA 293516
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | ||| ||||| | |||||||||||||| || |||| |||| |||| |||||
Sbjct 293517 AGAAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAG 293576
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283
|| || || | |||| ||||||||||||||| | ||| ||||
Sbjct 293577 AGATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACCCT 293622
>seq825
Length=464296
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | |||||||||||| || |||||||| ||
Sbjct 424295 CCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAT 424354
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| ||| |||| || ||||||||||| || |||
Sbjct 424355 AGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 424414
Query 131128 ATTCCTTCTTTGTC 131141
|||||||| |||||
Sbjct 424415 ATTCCTTCCTTGTC 424428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472006829038080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |