Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq347 96.9 3e-15 seq249 91.5 1e-13 >seq347 Length=198302 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || ||||||| | || || ||||| || Sbjct 168925 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 168984 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || ||||| ||||| Sbjct 168985 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAG 169044 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || |||| ||||| | || ||||| Sbjct 169045 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACCCTCTCAGACTACAAC 169104 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 169105 ATCCAGAAGGAGTCCACACTTCA 169127 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || || ||||||| | || || ||||| || Sbjct 169153 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 169212 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| ||||| || || || ||||| ||||| Sbjct 169213 GACACCATCGACAACGTCAAGACCAAGATTCA-AGACAAGGAGGGAATCCCACCAGACCA 169271 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCAC 25162 ||||| | || || |||||||| || | || |||| ||||| Sbjct 169272 GCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCAC 169316 >seq249 Length=210267 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCAC 25090 ||||||| | || || ||||| |||||||||||||| || || ||| || ||| Sbjct 84273 CCATCACCCTTGAGGTCGAGTCCTCTGACACTATCGA--CAATGTCAAGACCAAGATCCA 84216 Query 25091 TGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGA 25150 ||||| || || ||||| || ||||||||||| | || ||||| || || ||||| || Sbjct 84215 AGACAAGGAGGGAATTCCGCCAGACCAACAGCGATTAATCTTTGCTGGAAAGCAATTGGA 84156 Query 25151 AGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 |||| || || || |||| ||||| || ||||| Sbjct 84155 GGATGGACGTACCTTGAGCGACTACAACATCCAAAA 84120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322655440780