Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq347 111 1e-19 seq249 86.0 5e-12 >seq347 Length=198302 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || ||| |||| ||||| || || | | ||| ||| | ||| | |||| Sbjct 180257 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTCAAGACC 180198 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||||||||||||||| || ||||| || || || || | || || |||||||| Sbjct 180197 AAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 180138 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | || ||| ||||||| | || || |||||||| || || |||||||| | || Sbjct 180137 CAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCACTCTCCAC 180078 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | ||||| ||| Sbjct 180077 TTGGTTCTACGTCTCCGCGGTGGT 180054 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || ||| |||| ||||| || || | | ||| ||| | ||| | |||| Sbjct 170488 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTCAAGACC 170547 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || ||||| || || || || | || || |||||||| Sbjct 170548 AAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCAAG 170607 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | || ||| ||||||| | || || |||||||| || || |||||||| | || Sbjct 170608 CAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCACTCTCCAC 170667 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | ||||| ||| Sbjct 170668 TTGGTTCTACGTCTCCGCGGTGGT 170691 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| | || || || | | Sbjct 168925 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 168984 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || ||||| || || Sbjct 168985 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAG 169044 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | |||||| |||||| |||| || |||||| Sbjct 169045 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACCCTCTCAGACTACAAC 169104 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 169105 ATCCAGAAGGAGTCCAC 169121 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| | || || || | | Sbjct 169153 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 169212 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||||||||||||||| || ||||| || || Sbjct 169213 GACACCATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAG 169272 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || || | || || |||||||| ||| | |||||| |||||| Sbjct 169273 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACC 169317 >seq249 Length=210267 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || ||||| | || || || || |||| ||||| || || || | || || | Sbjct 84299 TTTCGTCAAAACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTAT 84240 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || |||||||||||||| ||||| || || ||||| || | Sbjct 84239 CGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCGCCAGACCAACAGCGATT 84180 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || |||||| || ||| | ||| |||||||| ||||| Sbjct 84179 AATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACCTTGAGCGACTACAACATCCAAAA 84120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722823179780