Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq721 230 4e-55 seq400 145 1e-29 >seq721 Length=773014 Score = 230 bits (254), Expect = 4e-55 Identities = 373/523 (71%), Gaps = 23/523 (4%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAAC 42691 ||||||||| |||||||| |||||||| || || ||||| | || | | || | || Sbjct 708059 CCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGA-TGACAACTCTAC 708001 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || |||||||| ||||||||| |||||||| Sbjct 708000 CTTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT 707941 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || ||||||||||||||| || ||| || |||||||| | |||||||| |||| Sbjct 707940 TGCATCTATCTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCCGGCTTGACCTTCTCCAACG 707882 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | |||||||| |||| | ||||||||||||||||| ||||| | Sbjct 707881 AACTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTC---AC 707825 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| | ||||| ||| || ||||| ||||||||||| ||||| || | | Sbjct 707824 AGCTCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAA 707765 Query 42931 TCGAGAAGGAGTTCCTCA-CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 | ||| |||| ||| | | || || | | || || ||||||||||| | Sbjct 707764 TTGAGCAGGAATTCTTGAGCGAAG-CATTACCATGCAGATTGCTCGGCATGAACTCTACC 707706 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGG---TC 43044 ||||||||| |||||||| ||| || || || | |||| || ||| | | || | Sbjct 707705 CTCATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGC--GCTTGGCAATG 707648 Query 43045 TCAGCCGCCTCTACAACACGCCGT--GCCCCTTCGACTTTATGGAGAACATCTCGTTGGA 43102 | | | |||| ||||||| |||||||||||| |||||||||||||| | | Sbjct 707647 TTA---AGGTTTACA--ACGCCGTCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGC 707593 Query 43103 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 || ||||| |||||||||||||||||||||| || |||||| Sbjct 707592 CGGAAAGACTAACTTTTTCGAGAAGCGCGTCGGTGATTACCAG 707550 >seq400 Length=377941 Score = 145 bits (160), Expect = 1e-29 Identities = 352/530 (66%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCA 244974 ||| || || ||||||||| || ||| ||| | || || |||||| ||||| Sbjct 294248 GTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCA 294307 Query 244975 CATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAG 245034 ||||||| |||| ||||| | | ||| | || |||||| |||||||| ||||| | Sbjct 294308 CATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAA 294367 Query 245035 GGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAA 245094 ||| | ||| || || | | | | || || ||| |||||| ||||| || || Sbjct 294368 GGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAA 294427 Query 245095 AAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTT 245154 ||| ||||| ||| ||||||| ||||| | ||||| |||| || || || ||||| Sbjct 294428 CCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTT 294487 Query 245155 GTTGCCTCCCTGGTCCACCATCCTCTCGAG----CGCGTTGAAGATGCGCAGGGTAGGCA 245210 |||||| || || | || | | |||| ||||| |||| || || |||| | Sbjct 294488 GTTGCCACCTTG----ATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAA 294543 Query 245211 CTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGC 245270 | | ||||| || |||||| || || ||||| | || || | | || | | Sbjct 294544 CAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATG-CGA 294602 Query 245271 TG-ATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTG 245329 || ||| | ||| | || || ||| ||| || || | || || |||||| |||| Sbjct 294603 TGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTG 294662 Query 245330 TCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGG 245389 || || ||||| ||||||||| |||| ||| | || ||||| || || || || Sbjct 294663 TCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGC 294722 Query 245390 GGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || | || ||| | |||||| || || ||| |||||| || ||||| Sbjct 294723 GGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTA 294772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327254109120