Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq347 122 2e-22 >seq347 Length=198302 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| | ||| ||||||||||| ||||| ||||| |||||| Sbjct 170882 TCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAG 170823 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||| || || ||||| || |||||||| |||| || || Sbjct 170822 ATGAGGCGCTGCTG---GTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACA 170766 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 170765 TTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTC 170706 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 170705 ACGAAGATTTGCAT 170692 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| | ||| ||||||||||| ||||| ||||| |||||| Sbjct 179863 TCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAG 179922 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||| || || ||||| || |||||||| |||| || || Sbjct 179923 ATGAGGCGCTGCTG---GTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACA 179979 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 179980 TTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTC 180039 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 180040 ACGAAGATTTGCAT 180053 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| || || ||||| || ||||| | | Sbjct 169151 CCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAG 169092 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || |||||||||| ||||| || |||| Sbjct 169091 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169032 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | || || || || Sbjct 169031 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACC 168972 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || |||| |||||||||||| || ||||| Sbjct 168971 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| ||| || ||||| || ||||| | Sbjct 170690 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 170631 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | ||| || || |||||||||| ||||| || |||| Sbjct 170630 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 170571 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||||| || || || Sbjct 170570 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACC 170511 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||||||||| ||||||| Sbjct 170510 TCAAGGGTGATCGTCTTTCCGGTCA 170486 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | ||| ||| || ||||| || ||||| | Sbjct 180055 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 180114 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | ||| || || |||||||||| ||||| || |||| Sbjct 180115 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 180174 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || || || || || | || ||||| || || | ||||| || || || Sbjct 180175 ATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACC 180234 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||||||||| ||||||| Sbjct 180235 TCAAGGGTGATCGTCTTTCCGGTCA 180259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639104306136