Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq400 118 1e-21 seq721 111 2e-19 seq172 89.7 6e-13 seq609 82.4 9e-11 >seq400 Length=377941 Score = 118 bits (130), Expect = 1e-21 Identities = 404/627 (64%), Gaps = 11/627 (2%) Strand=Plus/Plus Query 114698 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 114757 ||||| |||||| ||||| ||||| ||||| | || | || || || || Sbjct 294240 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 294299 Query 114758 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGG 114817 | ||||| | ||||| ||| | ||| || || || ||||||||||| ||||| || Sbjct 294300 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 294359 Query 114818 ATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 114877 ||||| | || |||| ||||| ||| || |||||||| | || || || | | Sbjct 294360 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 294419 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 | || || ||| | || ||| |||||||| || || ||||| | |||| || || Sbjct 294420 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACC- 294478 Query 114938 TTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGC 114991 | |||| ||| | || | || || | || || || | ||| || || ||| Sbjct 294479 --AGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGC 294536 Query 114992 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTG 115051 || |||| | ||| | ||| ||| ||||| || | ||| || | |||||| | Sbjct 294537 ATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGG 294596 Query 115052 ACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 115111 | ||| |||| | || ||||| || || |||||| || || || | || Sbjct 294597 ATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTG 294656 Query 115112 AGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGAC 115171 || || ||||||| || ||||| ||| |||| | | || |||||||| ||| Sbjct 294657 AGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAG 294716 Query 115172 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 115231 | ||| || ||||| || |||||||| || || || | ||||| |||| || | Sbjct 294717 AGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAA-GTATTT 294775 Query 115232 -TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 115290 | ||||| | | ||| |||| | | | | |||||| || |||||||| |||| Sbjct 294776 GTTAGACATGTAGTTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGAC 294835 Query 115291 CGAGACCCGCATAAACATGTATTGGGG 115317 | || ||||| | ||| | ||| || Sbjct 294836 TGCCACACGCATGATCATATGTTGTGG 294862 Score = 93.3 bits (102), Expect = 5e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 ||| |||||| || || || || |||| ||| || || |||||| ||||||||||| | Sbjct 294004 CAGAGTACTCAATGATCTCAGTGCACAGATTGGAGCTGCGAATGGTTCCCAAGTTCTTCT 294063 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 |||| ||| ||| || ||||| |||||||||||| | || | || ||||| || | Sbjct 294064 GATTGCTCTTGCGGTTGCAAGCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCGGTCT 294123 Query 114630 GGGACTTG-AGAATAGCCTTCCAGA 114653 ||| |||| ||||| || | ||||| Sbjct 294124 GGG-CTTGAAGAATGGCGTACCAGA 294147 >seq721 Length=773014 Score = 111 bits (122), Expect = 2e-19 Identities = 342/517 (66%), Gaps = 14/517 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || ||||||||||| ||||| ||||| ||| | | ||| |||||||| Sbjct 707553 GTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCGAGAGAGATGTTCTCCAT 707612 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 || || || ||||| | ||| ||| || || |||| | | ||||| Sbjct 707613 GAAGTCGAAGGGGTTGACGGCGTTGTAAACC-TTAACATTGCCAAGCGCAAGCAAGAGAC 707671 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | || |||| ||||||| |||| ||||||||| |||| | | | Sbjct 707672 GATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGC 707731 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 |||| | || || | ||| ||| |||||||| || || || | ||||||| Sbjct 707732 ATGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGC 707791 Query 125997 GAATGGTGTCCACCCCAGG--TCTA-TTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACT 126053 | | || || | ||| ||| ||| || | || ||| || |||||| | Sbjct 707792 GGACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAGAGGAGG--CA-GGCAAAGT 707848 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 | ||| | |||||||| || ||||||||||| || |||||| || || ||||||| Sbjct 707849 CGGTGTGCATTCCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAAGCCGGGCATGA 707908 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 |||| |||||||| | |||||| || | ||| | || ||||||||| ||||| | Sbjct 707909 GACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGA 707968 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCG-CGACTTTGTGTCAAA-CCACT 126230 || ||||| || | ||||||| ||||||| || | | | | | |||| ||||| Sbjct 707969 CAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAGTTGTCATCG---CAAATCCACT 708025 Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||| ||||| | ||||| || ||| || ||||| Sbjct 708026 TCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGGGAC 708062 >seq172 Length=385108 Score = 89.7 bits (98), Expect = 6e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 160776 CAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCACACAGATTTCCAAA 160835 ||||||||| ||| ||||| ||| || | |||||||| | | |||| |||||| | Sbjct 99645 CAGACTACAGAGGCGAAGTAAAAATCATCCTCTTCAACTTCAGCGACACCGATTTCGCCA 99586 Query 160836 TCAAAAGGGGGGATCGCATCGCGCAACTCATCTTAGAGAGGTGCGAGACGCCCCAAGTTG 160895 ||||| ||||| |||||||||||| | ||| | |||||| | |||||| | |||| Sbjct 99585 TCAAAGAAGGGGACCGCATCGCGCAATTGATCGTTGAGAGGATATACACGCCCGATGTTG 99526 Query 160896 AAGAAATTGGCGCGGTTGAGGAGACCGAGAGAGGTTCGGGTGGATTTGG 160944 | ||| || | | |||| | | ||||||| | ||||| ||||| Sbjct 99525 TCGTGGTTGACGAGTTGGAGGCAAGTGTGAGAGGTGCCGGTGGGTTTGG 99477 >seq609 Length=75599 Score = 82.4 bits (90), Expect = 9e-11 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 10958 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGT-TGATTTTCACGGGCAAC 11016 || || | |||||| |||||||| ||||||| ||| || ||| || | ||| | || Sbjct 69099 TTCCCAATGGCGTCGATTTCATCAATGAAAATGATGCAAGGTGTGTTCTTC-CTCGCGGT 69041 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGC 11076 | || | |||||| || | | |||||||||||||||||| ||||| || | | Sbjct 69040 GGCGAACAGATCTCGAACACGAGATGGACCGACACCCACAAACATCTCCACGAACTCAGA 68981 Query 11077 GGCG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11135 | || ||| | || ||| || || ||||| || || | ||| |||||| || | Sbjct 68980 GCCGCTCACACT-GAAGAATGGAACACCAGATTCGCCAGCTGTTGCTTTGGCGAGCAGCG 68922 Query 11136 TCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 11191 |||| || || ||||| ||| | |||| |||||| || || ||| | |||||| Sbjct 68921 TCTTGCCAGTTCCAGGAGGCCCAGAAAGAATGGCACCGCGAGGAATCTTCGCACCA 68866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346043476960