Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31]
1,012 sequences; 55,125,376 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq721 120 3e-22
seq347 104 2e-17
seq249 84.2 2e-11
>seq721
Length=773014
Score = 120 bits (132), Expect = 3e-22
Identities = 340/516 (66%), Gaps = 11/516 (2%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATC-GAGAGCGACACCGC 52384
|| || ||| | ||||| ||||| | |||||| |||||||||| | || |||| | |
Sbjct 708062 GTCCCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGAT-GACAACTC 708004
Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444
|| | || ||| | || || ||||| |||||||| | || || ||||
Sbjct 708003 TACCTTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGC 707944
Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504
|||||| | ||||| | | || | | || | ||||||||| |||| ||| |||
Sbjct 707943 CTTTGCATCTATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAA 707884
Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564
||| | || || |||||||| ||| ||||||| |||||||| |||||| || |
Sbjct 707883 CGAACTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACA 707824
Query 52565 GCGCGTGACCGAAAAATTGGATTCG---GACACGATCCTGAGCATGTTCAAGGAGGCGGT 52621
|| | || || || | |||| || | ||| ||| ||| ||||| ||
Sbjct 707823 GCTCA--AC--AAGAA--GCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGT 707770
Query 52622 GGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGC 52681
|| || |||| || || | | || | || | |||| ||||||||| |
Sbjct 707769 ACAAATTGAGCAGGAATTCTTGAGCGAAGCATTACCATGCAGATTGCTCGGCATGAACTC 707710
Query 52682 GCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA 52741
||||||| |||||||||||||||| || |||||||| ||| | ||| || |
Sbjct 707709 TACCCTCATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAA 707650
Query 52742 GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGG 52801
||| | |||||| ||| || || || || ||| | ||||| || || | ||
Sbjct 707649 TGTTAAGGTTTACAACGCCGTCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGG 707590
Query 52802 CAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| ||||||||||||||||| ||||| || ||
Sbjct 707589 AAAGACTAACTTTTTCGAGAAGCGCGTCGGTGATTA 707554
>seq347
Length=198302
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| || | ||| | || || || | | | |||||||| || ||||||||||||||
Sbjct 170919 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCT 170860
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| ||||| ||| || | ||| || |||| |||| || ||||| ||||| |||||
Sbjct 170859 CAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGG 170800
Query 138507 TATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| || | || |||| || | |||||| | || || |
Sbjct 170799 AATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTG-TCGATGGTGTCAGAGGATTCAA 170741
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||| || | || || || || || || || || || || |||||
Sbjct 170740 CTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| || | ||| | || || || | | | |||||||| || ||||||||||||||
Sbjct 179826 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCT 179885
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| ||||| ||| || | ||| || |||| |||| || ||||| ||||| |||||
Sbjct 179886 CAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGG 179945
Query 138507 TATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| || | || |||| || | |||||| | || || |
Sbjct 179946 AATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTG-TCGATGGTGTCAGAGGATTCAA 180004
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| |||| || | || || || || || || || || || || |||||
Sbjct 180005 CTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053
>seq249
Length=210267
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
||||||| |||||||||||||||| ||||| ||||| | ||| || || | | |||
Sbjct 84118 CCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGA 84177
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGT 138543
||| ||||||||||| || || || || || ||||| ||| || | || ||||
Sbjct 84178 TTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG- 84236
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | ||||| | ||||| ||||| | || | || || || || || ||||| ||
Sbjct 84237 TCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACG 84296
Query 138604 AAA 138606
|||
Sbjct 84297 AAA 84299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256122280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |