Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq347 143 6e-29 seq825 113 1e-19 >seq347 Length=198302 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||||| |||| ||||||||| | | || | |||||| Sbjct 169136 AGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCC 169077 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| | ||||||||||| || || || || ||| Sbjct 169076 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 169017 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||||| || || || ||||| ||||| ||| Sbjct 169016 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 168957 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | ||| || || || ||||| Sbjct 168956 TTGCCCGTCAAAGTCTTGACGAAGATTTG 168928 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||||||||| |||| ||||||||| ||| || Sbjct 170912 CGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTA 170853 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||||| |||||||||||||||||||| ||||||||||| ||| ||| ||| Sbjct 170852 CGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCT 170793 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | ||| || || | Sbjct 170792 TCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGT 170733 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || ||||| || ||||| Sbjct 170732 GTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTG 170695 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||||||||| |||| ||||||||| ||| || Sbjct 179833 CGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTA 179892 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||||| |||||||||||||||||||| ||||||||||| ||| ||| ||| Sbjct 179893 CGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCT 179952 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | ||| || || | Sbjct 179953 TCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGT 180012 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || ||||| || ||||| Sbjct 180013 GTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTG 180050 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||||||||| || ||||| |||| ||||||||||| ||| || | |||||| Sbjct 180070 AGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 180129 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | ||||||||||| || ||||| || || Sbjct 180130 TCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 180189 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 180190 TGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTC 180249 Query 199598 TTACCCGT 199605 || || || Sbjct 180250 TTTCCGGT 180257 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||||||||| || ||||| |||| ||||||||||| ||| || | |||||| Sbjct 170675 AGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 170616 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | ||||||||||| || || || || ||| Sbjct 170615 TCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 170556 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 170555 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTC 170496 Query 199598 TTACCCGT 199605 || || || Sbjct 170495 TTTCCGGT 170488 Score = 105 bits (116), Expect = 2e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||| || |||||||| ||||||||||| | ||||||||||| || ||||| || Sbjct 169311 TCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTC 169252 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || |||||||| ||| ||| |||| |||||||| || || || ||||| || Sbjct 169251 CTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGT 169192 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| ||||| | ||| || || || ||||| Sbjct 169191 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTG 169156 >seq825 Length=464296 Score = 113 bits (124), Expect = 1e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| ||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 424301 CGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTG 424360 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| ||||||||||| | ||||||||||| || |||||| Sbjct 424361 CGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCT 424420 Query 199529 TC 199530 || Sbjct 424421 TC 424422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178906313807804