Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq721 149 6e-31 seq347 116 4e-21 seq249 109 5e-19 >seq721 Length=773014 Score = 149 bits (164), Expect = 6e-31 Identities = 202/281 (72%), Gaps = 3/281 (1%) Strand=Plus/Plus Query 133171 GTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCG 133230 || ||||| ||| || || | || || || | ||| ||||||||||||||||| ||| Sbjct 708167 GTCTCGATCAGGAGGGAGTATGTCTCGGAATGGATGTTTTCCATGGCGATTTGAAAACCG 708226 Query 133231 TAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCG 133290 |||||||| || || || ||||| ||||| | ||||| |||| || || ||| Sbjct 708227 TAAAAGCATCGGGCTTCTGGAACCTGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCG 708286 Query 133291 TTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCG 133350 ||||||||||| || || |||||||| || || | ||| ||||||| ||| ||| Sbjct 708287 TTGACGATGCCATCCGATGCTGCGAAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCG 708346 Query 133351 TTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACG 133407 | |||||||| ||| | |||||| | ||| ||||| || || | ||| ||| || Sbjct 708347 TCGTCGTTCAGGCGGTTGTTCCAGTCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCG 708406 Query 133408 GTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 |||||||| || ||| || || |||||||| | ||| || Sbjct 708407 GTCCAAAATGAGGCCATTGCCTTCTTGTACATGCGCCAGAT 708447 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| |||||||| | || |||||||||||| ||| ||||| Sbjct 707838 GCAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAA 707897 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 |||||||||||| ||||| || |||||||| || || | || || ||| ||||| Sbjct 707898 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAA 707957 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGC 133047 || |||||||| || ||||| || || || ||| Sbjct 707958 GATACCCTCGACAGCTGCGAATGCGACGAGACGC 707991 >seq347 Length=198302 Score = 116 bits (128), Expect = 4e-21 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || || || |||| || || || | Sbjct 170692 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 170751 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| || || ||||| | |||| Sbjct 170752 GACACCATCGACAATG--TCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACC 170809 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || || |||| |||| || || | | |||||||| Sbjct 170810 AGCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACA 170869 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||| |||| |||||||| ||| | | |||||| Sbjct 170870 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGC 170919 Score = 116 bits (128), Expect = 4e-21 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || || || |||| || || || | Sbjct 180053 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 179994 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| || || ||||| | |||| Sbjct 179993 GACACCATCGACAATG--TCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACC 179936 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || || |||| |||| || || | | |||||||| Sbjct 179935 AGCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACA 179876 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||| |||| |||||||| ||| | | |||||| Sbjct 179875 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGC 179826 Score = 109 bits (120), Expect = 5e-19 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | |||||||| ||||||||| | || || ||| | | Sbjct 168925 ATGCAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 168984 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 168985 GACACCATCGACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACC 169042 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| | || | ||| ||||| ||||| || || | ||||||||| ||||||| Sbjct 169043 AGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACCCTCTCAGACTACA 169102 Query 38422 ACATCCAAAAGGA 38434 ||||||| ||||| Sbjct 169103 ACATCCAGAAGGA 169115 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || || || || |||||| | || || ||| | | ||||| | | | |||| | |||| Sbjct 170488 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACG--TCAAGA 170545 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || || | ||||| ||||| | || | ||| |||| Sbjct 170546 CCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 170605 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | || || || || | |||||| | |||||||||||||| |||||| | || || | Sbjct 170606 AGCAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCACTCTCC 170665 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 170666 ACTTGGTTCTACGT 170679 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || || || || |||||| | || || ||| | | ||||| | | | |||| | |||| Sbjct 180257 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACG--TCAAGA 180200 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| |||||||| || | ||||| ||||| | || | ||| |||| Sbjct 180199 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 180140 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | || || || || | |||||| | |||||||||||||| |||||| | || || | Sbjct 180139 AGCAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCACTCTCC 180080 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 180079 ACTTGGTTCTACGT 180066 >seq249 Length=210267 Score = 109 bits (120), Expect = 5e-19 Identities = 136/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| ||||| ||||||||||| ||||||||| | || |||||| || | |||| | Sbjct 84298 TTCGTCAAAACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTATC 84239 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||||||||| | ||||||||||| Sbjct 84238 GACAATG--TCAAGACCAAGATCCAAGACAAGGAGGGAATTCCGCCAGACCAACAGCGAT 84181 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | || || || || |||| || | || ||| | | ||||||||||||||||| Sbjct 84180 TAATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACCTTGAGCGACTACAACATCCAAA 84121 Query 38431 AGG 38433 ||| Sbjct 84120 AGG 84118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166472814080