Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq663 257 2e-63 seq393 114 2e-20 seq400 105 8e-18 seq97 105 8e-18 >seq663 Length=306411 Score = 257 bits (284), Expect = 2e-63 Identities = 480/700 (69%), Gaps = 14/700 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| |||||||| |||||||| || || || || || | ||||| || || ||||| Sbjct 218439 TCGAAGTCTTCACCGCCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 218380 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | || ||||| || || || ||||| || || || ||||| ||| Sbjct 218379 TCCTCAATGGTCAAAAGAGACACATCGAAGGTTCCGCCACCGAGATCGAAGATGAGAACG 218320 Query 7577 TTCGTATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || || | ||| ||| |||||||| || |||||||| || || || || Sbjct 218319 TTGCGCTCACCAGTGGCCTT----CTTGTCGAGACCATAAGCGATAGCAGCGGCTGTGGG 218264 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 ||| || || || ||||| ||| || |||||||| | || || || || ||||| Sbjct 218263 TTCGTTGATGATGCGAAGGACGTTGAGACCAGCAATGAGACCGGCGTCCTTTGTGGCTTG 218204 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| ||||| ||||| ||||| || ||||| || ||||| |||| |||| | || Sbjct 218203 TCGCTGCGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCGTTGTTGACGGTACCTCC 218144 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||| || ||||| ||| | || ||| ||||| | | ||| || || ||||| || | Sbjct 218143 GAGGTATGATTCAGCGGTCTCGCGCATCTTGGTCAAGATCATGGAGGAGATCTCCTCTGG 218084 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 | || || || || || || || |||| | | | || || ||| ||| Sbjct 218083 TGTGAAAGTCTTGGTCTCGCCCTTGAACTCAATCTGGACAACAGGCTTG-CCG-AGCTT- 218027 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | || | ||| | | | | |||||||| | ||||| | || | |||||| Sbjct 218026 GTCGACGATCTTGAAGGGGAAGTGCTTCATATCAGCCTGGACTTCAGCATCGGCAAACTT 217967 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | || || || ||||| ||||| || || ||||| |||||||||||| ||||| Sbjct 217966 GCGACCAATGAGGCGCTTGGCATCGAAGACAGTGTTGACGGGGTTCATGGCGACCTGGTT 217907 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 |||||||| ||| || || |||||||| || || || || || ||| | ||||| || Sbjct 217906 CTTCGCCGAGTCACCAATGAGACGTTCCGTA---TCTGTGAAGGCAACGAAGGATGGTGT 217850 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| ||||| ||||| | ||||| | | ||| || || Sbjct 217849 TGTGCGGTTACCCTGGTCGTTGGCAATGATTTCGATACGGTCATCTCTGAAGATACCCAC 217790 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 ||| || ||||| || || ||||| |||||||| ||| || Sbjct 217789 GCAGGAGTACGTGGTACCCAAATCGATACCGATAGCTGGA 217750 >seq393 Length=179740 Score = 114 bits (126), Expect = 2e-20 Identities = 242/358 (68%), Gaps = 6/358 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || ||||||| ||| Sbjct 155922 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGAGAGAACCTCAAAGACACCA 155863 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | | | |||||||| || || |||||||||| ||| | ||||| Sbjct 155862 GAGTCGACAGTGAGCGCGGAAACATCGAAGGTTCCACCACCCAAGTCGTACACAATGA-- 155805 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | || || || || | | ||| || |||||||| || | ||| || || ||||| Sbjct 155804 TCTGGCG-CTCCTCCTCGCTCTGCTTGTCAAGACCGTAAGCCAAAGCGGCTGCGGTTGGC 155746 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | || ||| ||| ||| || || || || || | ||||| || || || Sbjct 155745 TCGTTGACAACACGGAGAACGTTAAGACCGGCGATGGTACCAGCATCCTTGGTGGCGGCA 155686 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 ||||| ||||| |||||||| ||||| ||||| || |||| ||| || | || Sbjct 155685 CGTTGGTTGTCGTTGAAGTAGGCGGGGACGGTTACAACGGCGTTGACGACCTTTTGTCCC 155626 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || || || |||| || |||||||| |||||||| | || || || |||| Sbjct 155625 AAGTAGGACTCAGCGACTTCCTTCATTTTCTGGAGAACCATAGCGGAGATTTCCTCAG 155568 >seq400 Length=377941 Score = 105 bits (116), Expect = 8e-18 Identities = 338/522 (65%), Gaps = 17/522 (3%) Strand=Plus/Plus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || |||||||| ||| |||| ||||| | |||||| | || | |||||| || Sbjct 294240 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 294299 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | ||| || | | | ||| | |||| ||| ||||| |||||||||| || ||| Sbjct 294300 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 294359 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 ||||||| ||| | || || || ||| | ||| ||||| | || || ||| | Sbjct 294360 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 294419 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGC-AATAGACCC 105704 | || | | | || | ||||||||||||||| || | |||| || ||| ||| Sbjct 294420 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACC- 294478 Query 105705 TTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 | ||||| || |||||| || || | || || | || | | || || | Sbjct 294479 ---AGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAG 294535 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| |||| || ||| | ||||| || |||||||| | ||| | |||| | | || || Sbjct 294536 CATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCG 294595 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATACGCGCACACTC 105875 | || | || | || ||||| ||||| ||| | | ||| ||||| Sbjct 294596 GATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATA---GCACAAGT 294652 Query 105876 TTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGA 105935 || | || ||||| ||||| ||||| || || ||||| | |||| ||||| || || Sbjct 294653 CTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGA 294712 Query 105936 TGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 || | ||| ||| ||||| || || ||||| || || || Sbjct 294713 CGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGG 294754 >seq97 Length=152546 Score = 105 bits (116), Expect = 8e-18 Identities = 342/522 (66%), Gaps = 17/522 (3%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || || || ||||| |||||||| |||| | | || || |||||||| | | || Sbjct 101596 AGGTCTTCGAAACGGGCACGGGTGATGGTGGCAGTAAAGTCCTCGCCGTCGAAGAGGGAG 101537 Query 7304 TCAATTTCAATGGTTGTT--TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || || | ||| || || | || | || || || ||||| || || || || | Sbjct 101536 TCGATCTCGACGGTGGTGGATGAGGCGCTG--GACAAAGTACGCTTGGCACGTTCGCAAG 101479 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || ||||| | ||| || ||||| | | ||| || || || ||||| || || Sbjct 101478 CGGTACGTAACCTACGGAGAGCACGGGCATCACCAGAGATGTCCTTCTTGGTCTTTCGCG 101419 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||| | |||||| |||| ||| | | |||||||| | ||||||||||||| Sbjct 101418 AGAACTCCTTCTTGAAGTGGTCGAGCAAGT-TGGTGTCGAAATCCTGACCACCCAAGTGT 101360 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || || || ||||| |||| ||| || | |||| | | || ||| Sbjct 101359 GTGTCACCAGCTGTGGCCTTGACAGTGAAGACACCGCCCTGGATGTGAAGAAGGGAGACA 101300 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT- 7599 || || || || ||||| || || | || | || || | | | ||| | ||| Sbjct 101299 TCGAAAGTTCCTCCACCGAGATCGTAGATCAACACATT--TCGCTCCTTCTCAG-ACTTA 101243 Query 7600 -----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 | |||||||||| ||||| || || || || || || || || |||| || |||| Sbjct 101242 CCGGAACCGAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACA 101183 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || | || | | || || || || ||||| || || ||||| || || Sbjct 101182 -TTGAGTCCGGAGATGGAACCGGCGTCCTTGGTGGCTTGACGCTGGTTGTCGTTGAAATA 101124 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || || ||||| || | | || ||||| ||||| Sbjct 101123 AGCTGGAACGGTGACGACAGCCTTCTCAACCTTCTTTCCGAG 101082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635124765570080