Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq400 136 5e-27 seq483 98.7 1e-15 >seq400 Length=377941 Score = 136 bits (150), Expect = 5e-27 Identities = 313/464 (67%), Gaps = 18/464 (4%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || || || ||||| || || |||||||| |||||| | | ||||| |||| Sbjct 293091 CGGAGGTAGTACATTCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAGTA 293150 Query 109468 AGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 | ||| | ||||| |||| ||| | ||||| |||||| ||||| ||||| Sbjct 293151 ATCTTGCCCATGGTCGG-CTCTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAA 293209 Query 109527 TCGACCACGATCAGCCGCCATGTCGATGAT---ACACTTTTGGCTAATTTCCCAGACAGT 109583 |||||||| || |||||| ||| || || || |||| |||||||| || || Sbjct 293210 GGCGCCACGATCCGCAGCCATGGTGATAATGGTACGCT---GGCTGATTTCCCAAACCGT 293266 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 |||||| | ||||||||||||||||| | ||||| || ||||| |||| | Sbjct 293267 CTTGTAAAGGGCTTTGATATCATCGGGAATATTAGGAATGTTCTGGATAGA---ACCACC 293323 Query 109644 CTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTC 109700 || | |||| ||| |||||| | | |||||| ||||| | || |||||| | Sbjct 293324 CTCTGCAATGATACGATTCTTCATGTTGTCCGACCAAAGACCCATCTCGACGAGATCTTT 293383 Query 109701 AACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 | || ||| |||||| || ||||| |||||||| || || |||||| Sbjct 293384 GAGCAGCCATG--GGTTGACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATA 293441 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | |||||| || ||||| ||||| ||| || || ||||| | |||||||| || Sbjct 293442 TTTGACGTGTATGGCTCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTT 293501 Query 109819 GGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862 ||||| ||||| | ||||| ||| || | ||| | | |||| Sbjct 293502 GGCATAGGAGCAACAAGAAGTGAGTTGCGAATACCGTGCTTCTT 293545 Score = 125 bits (138), Expect = 8e-24 Identities = 390/599 (65%), Gaps = 15/599 (3%) Strand=Plus/Plus Query 110545 CCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCC 110604 ||||| | ||| | |||||| || || || || | ||| | ||| | ||| | Sbjct 294270 CCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTC 294329 Query 110605 TCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAA 110664 | || || | ||||||||||||||| |||||||||| || ||||||| ||||| | Sbjct 294330 TGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCA 294389 Query 110665 CGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGC 110724 || || ||||| | || ||||| | || || || ||| | || ||| | |||| Sbjct 294390 CGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGC 294449 Query 110725 CATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACA 110778 ||||| ||||| |||| |||| || | | |||| || | || | ||| Sbjct 294450 CATGGCTCGAGGTAGATGGCGA---ATGCACCAGGACGCTTGTTGCCACCTTGATCAACG 294506 Query 110779 TAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTT 110838 ||||| || || || | ||||| | ||||||||||| || || | ||| || ||| Sbjct 294507 TAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTT 294566 Query 110839 GTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCC 110898 || || | ||| || | |||| || ||| || || | | || |||||||| Sbjct 294567 GTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCA 294626 Query 110899 GCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATC 110957 || ||| ||| |||| | ||| |||| || | || ||||| || || || Sbjct 294627 GCGGTCTTTGAAATCATAGCACAAGTCT-TGAGGGTGTCGTAGATACCCTCGATGCTGTC 294685 Query 110958 TGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAA 111017 |||| || |||| || |||||||| || | || || |||| || || || ||||| Sbjct 294686 CTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAA 294745 Query 111018 GAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGT 111075 |||||||| | || || ||| || ||| ||||| | ||||||||| | | Sbjct 294746 AAGTGTAGGGGAGGCGTGCGTGA--AGTATTTGTTAGACATGTAGTTGTATGTCTGTATG 294803 Query 111076 GCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG 111134 || || | || | |||||||| || | || || ||||||| ||||| ||| || Sbjct 294804 GCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCATATGTTGTGG 294862 >seq483 Length=606724 Score = 98.7 bits (108), Expect = 1e-15 Identities = 210/314 (67%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 ||||| | ||| |||||||| | ||| || |||| || || | | ||||||| Sbjct 63943 GCGTCCAACTCGTCGATGAAAATGATGGCAGGAGACTTGGTGCGAGCGTTTGTGAAAAGT 63884 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802 || || |||||||||||||| ||||| || ||||||| |||| | || ||||| Sbjct 63883 TCCCGAACACGCTTCGCTCCGACACCGACATACATCTCGTCGAATTCTGATCCAGAAGCA 63824 Query 11803 TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTA 11862 | || ||| || ||| || || ||||||| |||| || || ||||| ||||| || Sbjct 63823 TAAAAGAACGGGACACCAGCTTCGCCAGCGACTGCTCTTGCCAGCAGAGTTTTACCAGTT 63764 Query 11863 CCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGC 11922 ||||||| ||| | || || | || ||| | |||| | || | || | | Sbjct 63763 CCAGGTGGGCCAACAAGCAGAACACCTTTGGGAAGCTTGCCGCCCAGTGTCGAGAATTGT 63704 Query 11923 TCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCC 11982 | ||| | || || || |||||| || | | || |||||||| |||| ||| Sbjct 63703 TTAGGGTCTTTTAGAAATGCCACAAGTTCTTGCAACTCTTCCTTGGCCTCGTCGCAACCT 63644 Query 11983 TCAACATCGGTGAA 11996 || |||||| |||| Sbjct 63643 TCCACATCGCTGAA 63630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968549453600