Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq400 190 2e-43 >seq400 Length=377941 Score = 190 bits (210), Expect = 2e-43 Identities = 420/627 (67%), Gaps = 11/627 (2%) Strand=Plus/Plus Query 106691 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 106750 ||||| |||||| ||||| ||||| ||||| |||| ||||| || || | Sbjct 294240 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 294299 Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 | || || | |||| ||| | ||| || || || ||||||||||| ||||| ||| Sbjct 294300 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 294359 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 ||||||| || | || ||||| | | || || ||||| | || ||||| || Sbjct 294360 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 294419 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | || | | | | || ||| |||||||||||||| || |||| |||| | || Sbjct 294420 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCA 294479 Query 106931 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 ||||| ||| |||||| || ||||| || || |||| ||| || || ||| Sbjct 294480 G---GACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGC 294536 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || |||| || ||| | ||| || ||||| || | ||| ||| | |||||| Sbjct 294537 ATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGG 294596 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | ||| |||| | || ||||| ||||| |||||| || ||||| | | Sbjct 294597 ATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTG 294656 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 || || | |||||||| | ||| ||||||||| || | || ||||||||| || Sbjct 294657 AGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAG 294716 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 | |||||| ||||| || || ||||| || || || | ||||| |||| || | Sbjct 294717 AGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAG-TATTT 294775 Query 107225 -TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 | ||||| | || |||||||| | | |||| |||||||| || ||||| ||||||| Sbjct 294776 GTTAGACATGTAGTTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGAC 294835 Query 107284 GGCCACACGCATAAACATGTATTGGGG 107310 ||||||||||| | ||| | ||| || Sbjct 294836 TGCCACACGCATGATCATATGTTGTGG 294862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 |||| | || || |||||||| ||||||||||| |||||| | | |||||| | Sbjct 293956 TTGGCAAAGCCATGGATGCCAAGTTGCAAACAGCAACCTCATCAGGCGCAGAGTACTCAA 294015 Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574 || || || |||| ||||| || ||| || ||||| ||||| || || ||||| Sbjct 294016 TGATCTCAGTGCACAGATTGGAGCTGCGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGC 294075 Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGA 106633 |||||| ||||| ||||| |||||| | || | || ||||| ||||| | |||| ||| Sbjct 294076 GGTTGCAAGCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCGGTCTG-GGCTTGAAGA 294134 Query 106634 ATTGCCTTCCA 106644 || || | ||| Sbjct 294135 ATGGCGTACCA 294145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973336742880