Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq976 122 1e-22 >seq976 Length=250414 Score = 122 bits (134), Expect = 1e-22 Identities = 142/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 154938 GTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGA 154997 |||||| | | ||||||||||| || | ||||| ||||| | || || || | || Sbjct 57574 GTTCATCAATACGGTGGTCAGGTTTACATGGATGGTGCAAACGTGAACGCCCAAATTGGT 57515 Query 154998 CTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTC 155057 || ||| ||||| |||||| ||||| || ||||| ||||| || || |||||| Sbjct 57514 CTTTGCTCACCTGGTGAGATTGGTGCCGATGTTTGCCATCTGAACTTGCACAAGACATTC 57455 Query 155058 TGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAA--AACATC 155115 ||||| || || |||||||||||||| || || ||||| || ||||| ||| |||||| Sbjct 57454 TGTATCCCTCACGGAGGTGGAGGTCCAGGTGTTGGTCCAATTGGTGT--CAAGGAACATC 57397 Query 155116 TCACACCATT 155125 ||||||| || Sbjct 57396 TCACACCCTT 57387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579205472958080