Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq347 147 5e-30 seq249 104 5e-17 seq825 89.7 1e-12 >seq347 Length=198302 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || ||||| || | || || | ||||| ||| Sbjct 169133 ACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCG 169074 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || |||||||| || ||||| || ||||| || Sbjct 169073 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGG 169014 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| || || || || | ||| | ||||| Sbjct 169013 ATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTG 168954 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | |||||| Sbjct 168953 CCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 131 bits (144), Expect = 4e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | ||| |||||||| || || || || ||||| || | |||| || | ||||||| Sbjct 180072 AACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAG-GTGCGGCCATCTT 180130 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| ||||| || |||||||| | || || |||||||| || || || || ||||||| Sbjct 180131 CGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTT 180190 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 |||| || ||||||||| || |||||||| | || || |||||||| | ||||| Sbjct 180191 GAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCT 180250 Query 195110 TTCCTGTCA 195118 |||| |||| Sbjct 180251 TTCCGGTCA 180259 Score = 127 bits (140), Expect = 5e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | ||| |||||||| || || || || ||||| || | |||| || | ||||||| Sbjct 170673 AACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAG-GTGCGGCCATCTT 170615 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| ||||| || |||||||| | || || |||||||| || ||||| || ||||| | Sbjct 170614 CGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCT 170555 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 | || || ||||||||| || |||||||| | || || |||||||| | ||||| Sbjct 170554 GGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCT 170495 Query 195110 TTCCTGTCA 195118 |||| |||| Sbjct 170494 TTCCGGTCA 170486 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||||||||| || |||||||| | || || |||||||| || || || || Sbjct 169310 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCC 169251 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || ||||||||| || |||||||| || || || || | ||| Sbjct 169250 TTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTG 169191 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||||||| || ||||| | |||||| Sbjct 169190 ATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153 Score = 116 bits (128), Expect = 8e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| ||| | || | || ||||| | ||||| || Sbjct 170888 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCG 170829 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || |||||||||||||| ||||| ||||| || || || |||| Sbjct 170828 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTG 170769 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || |||||||| || ||| ||||| || |||| ||||| || || | || Sbjct 170768 ACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTC 170709 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 170708 TTCACGAAGATTTGCAT 170692 Score = 116 bits (128), Expect = 8e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| ||| | || | || ||||| | ||||| || Sbjct 179857 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCG 179916 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || |||||||||||||| ||||| ||||| || || || |||| Sbjct 179917 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTG 179976 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || |||||||| || ||| ||||| || |||| ||||| || || | || Sbjct 179977 ACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTC 180036 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 180037 TTCACGAAGATTTGCAT 180053 >seq249 Length=210267 Score = 104 bits (114), Expect = 5e-17 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 ||||| ||| | | | ||||| || ||||| ||| |||| || | ||||| || | | Sbjct 84105 GTGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAG-GTACGTCCATCCTCCAATT 84162 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 |||| || || ||||| | ||| ||||||||||| ||||| || || |||||||| || | Sbjct 84163 GCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCT 84222 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 | |||||| || || || ||||| || || || |||||||| | ||||| || | Sbjct 84223 TGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCG 84282 Query 195116 TCAAAGTTTTTACGAA 195131 | | ||||| ||||| Sbjct 84283 TGAGGGTTTTGACGAA 84298 >seq825 Length=464296 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | || || | ||||||||| Sbjct 424313 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCTTCG 424372 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| | || || |||||||| || || ||||| |||||| Sbjct 424373 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 424429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467214184204