Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq721 116 7e-21 >seq721 Length=773014 Score = 116 bits (128), Expect = 7e-21 Identities = 342/518 (66%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| || ||||| ||||| || | | ||||||||||| Sbjct 707550 CTGGTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCGAGAGAGATGTTCTC 707609 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| |||||||||| | ||| || ||| | || ||| | | || | Sbjct 707610 CATGAAGTCGAAGGGGTTGACGGCGTTGTAAACCT-TAACATTGCCAAGCGCAAGCAAGA 707668 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| || || |||||||||| | |||||||||| ||||||||| ||| Sbjct 707669 GACGATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCC---GAGCA 707725 Query 48018 ACACG---GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | | || || || | | | || |||| ||| || || || || || | | Sbjct 707726 ATCTGCATGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGA 707785 Query 48075 TCT-GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || | || | | || || || ||| || || || | |||| | |||| Sbjct 707786 TGGCGCGGACGGCTTCAGGC-GAAGGCTTCTTGTTGAGCTG--TGAGA-AGAGGAGGCAG 707841 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||||| || ||||| || |||||| ||||||||||| | || Sbjct 707842 GCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAAGCCG 707901 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | || || | ||| ||||||||| Sbjct 707902 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATA 707961 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| ||| ||| | | | | || | || ||| | || | ||| Sbjct 707962 CCCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGTAGAGTTGTCATCGCAAATC 708021 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 708022 CACTTCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGG 708059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521016110080