Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq400 226 3e-54 >seq400 Length=377941 Score = 226 bits (250), Expect = 3e-54 Identities = 1136/1793 (63%), Gaps = 75/1793 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||| || ||| ||||||| ||||| || |||||||| |||| | Sbjct 294862 CCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCC 294803 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | |||||||| || | ||||| | | || |||| ||||| | || || || || Sbjct 294802 ATACAGACATACAACTACATGTCTAACAAATAC-TTCACGCACGCCTCCCCTACACTTTT 294744 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || ||||| |||||| | || ||||||||| || | || |||||||| Sbjct 294743 CAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGA 294684 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | |||||||| | || || | | ||||| || |||||| ||||| Sbjct 294683 CAGCATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGG 294624 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | |||| ||| | |||||| | ||| ||| | || ||||| Sbjct 294623 TGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCATACATTGGAGGAACAAA 294564 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || ||| | ||| || |||| ||||| || || ||| |||| || || ||||| || Sbjct 294563 CGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGT 294504 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624 |||||| | ||| | ||| | || ||| ||| ||||| | || |||||||| Sbjct 294503 TGATCAAG-GTGGCAAC--AAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCA 294447 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||||| || | | | | || | || ||||| || | ||||| || || Sbjct 294446 CGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGC 294387 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | ||||| || | || |||||||||| ||||| ||||||||||| || || || Sbjct 294386 TCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAA 294327 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| |||| | || || || || || ||||| |||| ||||| Sbjct 294326 TGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGA 294267 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATG-------AAGAG-GAGGGTAGAGCCAATGCG 75856 ||||| ||||| |||||| ||||| | ||| | | || |||||| | Sbjct 294266 CGAGTTCGAAGCTCTCTACGAGAAGTAAGTTGCCACAAGTGCTTGACTACCGCCAATACT 294207 Query 75857 A----CT-----GTACCA--------GCC---GCCG--------------------ATGT 75876 | || |||| | ||| |||| | | Sbjct 294206 AACCGCTCCCAGGTACGAGAAAGAAGGCCGTGGCCGTGAAACTATCCGTGCCCAAAAGCT 294147 Query 75877 TTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936 ||| | || ||||| || | ||||| |||||||| | || | ||||||||||| || Sbjct 294146 CTGGTACGCCATTCTTCAAGCCCAGACCGAGACTGGCAACCCTTTCATGCTTTACAAAGA 294087 Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996 |||||| ||| ||||| || || ||||| |||||||| || ||||| ||||| || Sbjct 294086 TGCTTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTCGCAGCTCCAATCTGTG 294027 Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 ||| || || | |||||| | | |||||| ||||||||||| |||||||| || Sbjct 294026 CACTGAGATCATTGAGTACTCTGCGCCTGATGAGGTTGCTGTTTGCAACTTGGCATCCAT 293967 Query 76057 CGCCCTTCCAAAGTATGTCAATGAAGAGACTC-GCACTTTTGATTATGAAAAACTT-CAT 76114 || | |||| | || | | | || | || | ||||| | || || || || Sbjct 293966 GGCTTTGCCAACCTTCGTTGACGTTCA-ACGCGGCGTCTATGATT-TCAACAAGTTGCAC 293909 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 ||| || ||| ||| | || | ||| |||||||| || |||||| Sbjct 293908 GAAGTCGTCCAGACTGTCATTCGCAACTTGAACAAGATCATTGACGTCAACCACTATCCC 293849 Query 76175 GTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 ||| || || || || ||| | || | ||| | ||||| || ||| Sbjct 293848 GTTCCCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGGGT 293789 Query 76235 CTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 || || |||| || || | | | || | | || || || || || ||| || | Sbjct 293788 CTTGCTGATGCTTTCCTTGCTCTTCGCCTGC-CCTTCGAGTCTCCCGAGGCAAAGAAGCT 293730 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 || || ||||| || ||||| || || || || || | || | | || Sbjct 293729 CAACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCTTGC 293670 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 ||| |||| | || | || | ||||| ||||| | ||||| || | || || Sbjct 293669 ACAAGAAGAAGGCACATACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTCTCCA 293610 Query 76414 GTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAA 76471 || || |||| |||| || | || | | || || |||||||| ||||||| Sbjct 293609 GTACGACATGT-GGAACGTCACTCCTACGGATC-TCTGGGACTGGGACTCGCTCAAGGCT 293552 Query 76472 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 76531 |||||| || | ||| |||| ||| ||| | | || || |||||||| || ||| Sbjct 293551 GATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTTCC 293492 Query 76532 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTG 76591 || | ||||| | ||| || || ||||| || |||||||| |||| |||||| Sbjct 293491 ACATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACTCT 293432 Query 76592 AGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAG 76651 | | || || || || || | |||||| || |||| || ||| Sbjct 293431 CGTCGTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCGTC 293372 Query 76652 AAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATT 76711 |||| ||||| ||||| | | |||||| ||| || | || ||||||||| || Sbjct 293371 GAGATGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTATC 293312 Query 76712 CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC 76771 || || || | |||| || ||||||||||| || ||| || || ||||||||| Sbjct 293311 CAGAACATTCCTAATATTCCCGATGATATCAAAGCCCTTTACAAGACGGTTTGGGAAATC 293252 Query 76772 A---AGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGT 76828 | || | | | | || |||||| || |||||||| ||||||||||||| | Sbjct 293251 AGCCAG-CGTACCA--TTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCT 293195 Query 76829 CAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATG 76888 || || |||| | |||| || || || ||| |||| | |||| ||||| | Sbjct 293194 CAGAGCTTGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCCATGCACTTT 293135 Query 76889 TACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 | ||||| ||| ||||| || ||||||||||| |||||| | | ||| Sbjct 293134 GCTGGTTGGAAGATGGGTCTCAAGACTGGAATGTACTACCTCCGAACCATGGC 293082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562053394560