Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq953 84.2 6e-11 seq835 84.2 6e-11 >seq953 Length=641880 Score = 84.2 bits (92), Expect = 6e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| | ||| ||||| |||||||||||| | || || ||||| || ||||| || Sbjct 291820 CTTGACCAGACGCCGCTGGATATAACCAGTTTCGGCAGTCTTGACAGCGGTGTCAATGAG 291761 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| | ||||| |||| || || ||||| | ||| | ||| || || | | | | Sbjct 291760 ACCCTCTCGACCTGCCATGGCGTGAAAGAAGAACTCATGCGGAGTCAGACCGCGCAAATA 291701 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 ||| |||||||||| || || | || ||||||| ||| |||| ||| || |||| Sbjct 291700 CGAGTTCTCAACGAATCCCCGAGATTCTGGCGAATAATCGTCTTTGGCAAAATGAGGCA 291642 >seq835 Length=814277 Score = 84.2 bits (92), Expect = 6e-11 Identities = 107/147 (73%), Gaps = 8/147 (5%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| | | ||| | |||||||||||||||||| || ||||| ||||||||||| ||| Sbjct 451964 GCACCATAGGCAATAAGACAATCACGCTCCATTTCTCCCAAACGGAGACCACCATCTCGA 452023 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | ||| || | || |||||||| || | | || ||||| | | ||||| Sbjct 452024 GCACGACCTTCAGTGGGTTGACGAGTAAGCAGAGCGATTGGACCAGTAGCTCGAGCG--- 452080 Query 251601 ATGTTGCTTATCATTTACCATATGCTT 251627 || |||||| | ||||||||||| Sbjct 452081 -TGCATCTTATCCTGGACCATATGCTT 452106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798516045044