Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq953 129 7e-24 seq721 118 1e-20 seq400 116 5e-20 seq706 105 8e-17 >seq953 Length=641880 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||| |||||| | || |||||| | || |||||| | || ||||| Sbjct 447490 GCCGCCAACTACCTCGATATCAAGGCCCTTCTCGATGTCGGCTGCAAGACCGTTGCCAAT 447431 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct 447430 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAAACCTTCAACATCCAG 447380 >seq721 Length=773014 Score = 118 bits (130), Expect = 1e-20 Identities = 223/318 (70%), Gaps = 10/318 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || |||||| |||||||||||| ||||| || |||| ||||| Sbjct 707545 GCCTTCTGGTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCGAGAGAGATG 707604 Query 868751 AACTCCATCCACGGGAACGGGTTG--GGCGTCTTGTAGTGCTTTTCGCATCCGAGCG-AC 868807 |||||| | ||| |||||| ||||| |||| ||| | || |||| | Sbjct 707605 TTCTCCATGAAGTCGAAGGGGTTGACGGCGT--TGTAAACCTTAACATTGCCAAGCGCAA 707662 Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867 || || || || || || ||||||||||||||||||||||||||| | |||||||||| Sbjct 707663 GCAAG-AGACGATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCG 707721 Query 868868 A-TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 | | | || || | | ||||||| || || | ||| || | || |||||| Sbjct 707722 AGCAATCTGCA-TGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGT 707780 Query 868927 GATGATCTGCCTGGGC-ACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGC 868985 |||||| || || | | || | ||| ||||| ||| |||| | | |||| |||| Sbjct 707781 GATGAT-GGCGCGGACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAGAGGAGGC 707839 Query 868986 AGGCAAAGTCGCAGTGCA 869003 ||||||||||| ||||| Sbjct 707840 AGGCAAAGTCGGTGTGCA 707857 Score = 107 bits (118), Expect = 2e-17 Identities = 142/192 (74%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||||||| ||| | ||||||| |||| | |||||||||||| ||||||||| Sbjct 707860 CCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTC 707919 Query 869240 TTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||||||| ||||| | ||| || ||| ||| ||||| |||||||| || || || Sbjct 707920 TTGAGCCAGAAGATAGATGCA-AAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAA 707978 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| ||| ||| |||||| || || | || | | |||||||||| ||||| Sbjct 707979 TGCGACGAGACGCGATGCAAAG--GTAGA-GTTGTCATCGCAAATCCACTTCAGTGCCCA 708035 Query 869359 GTCGGCCTTTTT 869370 ||||||||| || Sbjct 708036 GTCGGCCTTCTT 708047 >seq400 Length=377941 Score = 116 bits (128), Expect = 5e-20 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || || |||||||| || || ||| |||||| |||||||| || || || ||||| || Sbjct 294498 TGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGAT 294557 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||| || || | | ||| | || | ||| || | || | || |||| Sbjct 294558 GTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCG 294617 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | ||| || || | || || ||||| ||||||||||| |||||| Sbjct 294618 ATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCG 294677 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||| ||||| |||| | ||| ||||| |||||| |||||| || | ||||| Sbjct 294678 ATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCT 294737 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 |||||||| || || || Sbjct 294738 GCGTTGAAAAGTGTAGG 294754 >seq706 Length=394770 Score = 105 bits (116), Expect = 8e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| || ||||| || || ||||| || || || |||| ||| || || ||| Sbjct 168180 GACAGCATTGGTGGCACAGTCACCTGCGTTCTGCGTAATGTACCGGTAGGACTGGGAGAG 168121 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||||||||| | |||||| ||| || ||||||||||| ||||| ||| | || Sbjct 168120 CCTTGCTTTGACAAATTGGAGGCCAAGCTTGCACACGCCATGCTCTCGATACCGTCGACG 168061 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 || |||||||| || ||| ||||| Sbjct 168060 AAAGGATTCGAAATCGGCTCTGGGTT 168035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107056150540804