Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq400 156 4e-33 >seq400 Length=377941 Score = 156 bits (172), Expect = 4e-33 Identities = 477/723 (66%), Gaps = 41/723 (6%) Strand=Plus/Plus Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364 ||||| |||||||| | ||||| |||| |||||||| || | |||| | | |||| Sbjct 294240 TACTTCTCGTAGAGAGCTTCGAACTCGT-CACCGTAGATATCGGCAAGACCAGGGCACTC 294298 Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424 || ||| |||||||| | ||| |||| ||| | ||||||| |||||||||| || || Sbjct 294299 GTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGG 294358 Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTA 139479 ||||||||| || | | | ||| || || |||||| | | ||| || | Sbjct 294359 AATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG------TGGTT 294412 Query 139480 CGTT-TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 | || ||| | | | | || || || ||||||||||| || || |||||||| | Sbjct 294413 CTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 294472 Query 139539 TGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595 ||| || || ||| ||||||||||| |||| || ||| | || || || Sbjct 294473 TGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACG 294532 Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGA-- 139653 | ||| || | |||||| ||| ||| ||||| || | | ||| || | | Sbjct 294533 GAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTA--TGATCCAGTG 294590 Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713 ||||||| | ||||| || | |||||| || || | || || || | | | ||| Sbjct 294591 GCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAA 294650 Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCA---GAAA 139769 || | | || ||||| ||||| |||||||| |||| ||||| | | | || Sbjct 294651 GTCTTG-AGGGTGTCGTAGATACCCTCGATGCTGTCCTCCT---TCGTGTCAATGAGGAA 294706 Query 139770 GCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT 139829 ||| ||||| ||||||||| | ||||| || || || ||||| |||||||| Sbjct 294707 GCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGT 294766 Query 139830 GAA-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888 ||| ||||| || ||||| | | ||| || | ||||| |||| ||| ||||| Sbjct 294767 GAAGTATTTG-TTAGACATGTAGTTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGT 294825 Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948 | || ||||| | || ||||| | ||||||||| || || || ||| || || Sbjct 294826 GAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGC---CGC 294882 Query 139949 tttttttCAG-----ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAA 140003 || || || || | || ||| || |||||| |||||||||| || ||||| Sbjct 294883 TTATTCGGAGTAGGTATGATCG--CTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAA 294940 Query 140004 ATC 140006 ||| Sbjct 294941 ATC 294943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891908795360