Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq953 129 9e-24 seq721 96.9 5e-14 seq400 96.9 5e-14 >seq953 Length=641880 Score = 129 bits (142), Expect = 9e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||||||||||||||| |||||| |||| |||||| | || ||||||||||| ||||| Sbjct 447490 GCCGCCAACTACCTCGATATCAAGGCCCTTCTCGATGTCGGCTGCAAGACCGTTGCCAAT 447431 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||| ||||| |||||| || Sbjct 447430 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAAACCTTCAACATCCAG 447380 >seq721 Length=773014 Score = 96.9 bits (106), Expect = 5e-14 Identities = 206/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || |||||| |||||||||||| ||||| || |||| ||||| |||||| Sbjct 707554 TAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCGAGAGAGATGTTCTCCATG 707613 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCG 794026 | ||| |||||| | | ||| ||| | || |||| | ||||| || || Sbjct 707614 AAGTCGAAGGGGTTGACGGCGTTGTAAACCTTAACATTGCCAAGCGCAAGCAAG-AGACG 707672 Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCA 794085 || || || || || ||||||||||||||||||| | ||||||||||| | | || Sbjct 707673 ATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCA 707732 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 || | | ||||| | || || | ||| || | || |||||| ||||||| || Sbjct 707733 -TGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGAT-GGCG 707790 Query 794146 TGGGC-ACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 || | | || | ||| ||||| | | |||| | | |||| ||||||||||||||| Sbjct 707791 CGGACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCG 707850 Score = 89.7 bits (98), Expect = 8e-12 Identities = 136/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||||||| ||| | ||||||| ||| | |||||||||||| ||||||||| Sbjct 707860 CCCTCGTCGCGAGAGATGAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTC 707919 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | || ||| ||| ||||| |||||||| || || || Sbjct 707920 TTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAAT 707979 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| ||| ||||| || || | || | | |||||||||| ||||| Sbjct 707980 GCGACGAGACGCGATGCAAAGGT----AGAGTTGTCATCGCAAATCCACTTCAGTGCCCA 708035 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 708036 GTCGGCCTTCTT 708047 >seq400 Length=377941 Score = 96.9 bits (106), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| | ||| | ||||||||| | || | ||||| ||| ||||||||| | Sbjct 294303 GGGCACATGAGAGTCCAGTCGCCATTCTGTT-CGACGCGCTTCATGAACAGGTCGGGAAT 294361 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||||| | | || || ||||| || || || || || ||||||||||||||| |||| Sbjct 294362 CCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAG 294421 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 2071997 || | ||||| || || ||||||||||| ||||| |||||| ||| || || || Sbjct 294422 ATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGG 294481 Query 2071998 GCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 294482 ACGCTTGTTGCCACC 294496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916138748944268