Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq347 125 5e-24 seq825 107 1e-18 seq249 98.7 6e-16 >seq347 Length=198302 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 169136 AGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCC 169077 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 169076 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 169017 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 169016 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 168957 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | ||||| || ||||| ||||| Sbjct 168956 TTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||||| ||||| ||||| || | | |||| |||| Sbjct 180070 AGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 180129 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 180130 TCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTC- 180188 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || |||||| | || | || | | ||| || |||| ||| || || Sbjct 180189 TTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGT 180248 Query 34945 CTTTCCCGT 34953 |||||| || Sbjct 180249 CTTTCCGGT 180257 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||||| ||||| ||||| || | | |||| |||| Sbjct 170675 AGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 170616 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 170615 TCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 170556 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | | ||| || |||| ||| || ||| Sbjct 170555 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTC 170496 Query 34946 TTTCCCGT 34953 ||||| || Sbjct 170495 TTTCCGGT 170488 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| | | || | || Sbjct 170903 AGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCT 170844 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||||||||||||| || || ||||||||| | || | || |||||||| Sbjct 170843 TCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCC 170784 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| || || || || | || || Sbjct 170783 TGGATCTTCGTCTTGAC--AT--TGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 170728 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||||||||| || ||||| ||||| Sbjct 170727 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| | | || | || Sbjct 179842 AGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCT 179901 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||||||||||||| || || ||||||||| | || | || |||||||| Sbjct 179902 TCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCC 179961 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| || || || || | || || Sbjct 179962 TGGATCTTCGTCTTGAC--AT--TGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 180017 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||||||||| || ||||| ||||| Sbjct 180018 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Score = 89.7 bits (98), Expect = 3e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| ||||||||||||| || ||||||||| | || Sbjct 169319 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169260 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | ||||||||||| || | | || || |||||| | || | || | ||| || Sbjct 169259 ATTCCCTCCTTGTC-TTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAAC 169201 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| ||||| | ||||| || ||||| ||||| Sbjct 169200 CTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153 >seq825 Length=464296 Score = 107 bits (118), Expect = 1e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| |||||||||||| |||| |||| Sbjct 424310 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCT 424369 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| || ||||||||| | || | || |||||||| Sbjct 424370 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTC 424428 >seq249 Length=210267 Score = 98.7 bits (108), Expect = 6e-16 Identities = 134/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| ||||| | | | || |||| |||| ||||||||| || |||| Sbjct 84118 CCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGA 84177 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | | ||| || |||||| |||| | ||||||||||| | || || ||||| || Sbjct 84178 TTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGAC--AT- 84234 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| ||| || |||||| |||| ||| |||||||| ||||||||||| || Sbjct 84235 -TGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTG 84293 Query 34964 ACAAA 34968 || || Sbjct 84294 ACGAA 84298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325688782986428